Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC003973.3-201ENST00000624863 2822 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 RNU4-2-201ENST00000365668 141 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AL136231.1-201ENST00000429407 730 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 RPL12P17-201ENST00000432393 498 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 CBX1P2-201ENST00000453841 458 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 NDUFA5P5-201ENST00000468361 342 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC109464.1-201ENST00000511091 819 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC012616.1-201ENST00000600294 197 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AC100767.2-201ENST00000604840 693 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AL365181.4-201ENST00000609800 547 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 Z83820.1-201ENST00000456978 1499 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS29Q9UBQ0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC125336.1-201ENST00000508893 2827 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC091305.2-201ENST00000624049 1576 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 RN7SKP28-201ENST00000364770 305 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 SNORA5.1-201ENST00000384275 131 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 BMS1P17-202ENST00000416720 316 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC017019.1-201ENST00000426129 261 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC016772.1-201ENST00000444170 1261 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC094085.1-201ENST00000468914 584 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 NPM1P21-201ENST00000513394 762 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 HMGN1P9-201ENST00000515212 298 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 OR11H3P-201ENST00000554547 982 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC027216.1-201ENST00000577726 685 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC016839.1-201ENST00000578162 867 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC005726.4-201ENST00000582858 458 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC108738.1-201ENST00000603703 237 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC135068.5-201ENST00000624197 983 ntBASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS29Q9UBQ0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS29Q9UBQ0 AL078621.3-201ENST00000623707 2042 ntBASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms