Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 EI24P3-201ENST00000399046 1062 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL050305.1-201ENST00000399993 1230 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 OR7E101P-201ENST00000400428 513 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL358178.1-201ENST00000407698 397 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL035660.1-201ENST00000422041 222 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 RPL19P16-201ENST00000433839 588 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 EEF1B2P3-201ENST00000447718 678 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AP000797.2-201ENST00000475768 606 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 MORF4L2P1-201ENST00000503761 858 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC027369.2-201ENST00000528030 440 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 HMGB1P42-201ENST00000532126 553 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC027369.5-201ENST00000533838 755 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC068305.2-201ENST00000550567 1205 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AP005403.1-201ENST00000579720 229 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC015802.2-201ENST00000589690 189 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AL365181.4-201ENST00000609800 547 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 AC024884.1-201ENST00000620583 399 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 CDY11P-201ENST00000447168 1651 ntBASIC5.17□□□□□ -1.58
VAPAQ9P0L0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 GVINP1-202ENST00000531871 7271 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 SNORA48.4-201ENST00000391089 134 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 RNA5SP431-201ENST00000410312 120 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 RANP7-201ENST00000418085 644 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 HMGN2P27-201ENST00000427352 270 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AL512637.1-201ENST00000439523 1231 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 UBE2V2P4-201ENST00000447495 259 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC002310.3-201ENST00000569728 723 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC244107.2-201ENST00000611773 76 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC091932.2-201ENST00000623014 291 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AL683826.1-201ENST00000624104 627 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AL390318.1-201ENST00000624564 687 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AC019072.1-201ENST00000604535 1551 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 AL022311.1-201ENST00000623726 19416 ntBASIC5.16□□□□□ -1.58
VAPAQ9P0L0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.16□□□□□ -1.58
VAPAQ9P0L0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
VAPAQ9P0L0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms