Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 GVINP1-202ENST00000531871 7271 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC004158.1-201ENST00000564508 4319 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC107977.1-201ENST00000355745 939 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC023490.2-201ENST00000359859 470 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 RNA5SP394-201ENST00000364216 119 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 RNA5SP131-201ENST00000365452 119 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 CXADRP1-201ENST00000398098 1095 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 CDY17P-201ENST00000414121 1282 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC113412.1-201ENST00000425840 504 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC073465.2-201ENST00000440938 498 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AL445665.1-202ENST00000452436 324 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AZGP1P2-201ENST00000454506 345 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 PFN1P8-201ENST00000497012 543 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 OR4A43P-201ENST00000532938 908 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC018809.2-201ENST00000602436 3823 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 CXADRP3-202ENST00000617265 1100 ntBASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC40Q9H9A6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC40Q9H9A6 AC144833.1-201ENST00000567953 4089 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 RNU2-18P-201ENST00000411224 162 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 HMGN1P20-201ENST00000411849 300 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 RPL24P2-201ENST00000421023 475 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC007161.1-204ENST00000423039 460 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC005297.1-201ENST00000444765 862 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AL358876.1-201ENST00000453364 1075 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC005363.1-201ENST00000530779 351 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC096586.2-201ENST00000610260 441 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AC025574.2-201ENST00000615621 514 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 MIPEPP2-201ENST00000422560 1819 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 AL022311.1-201ENST00000623726 19416 ntBASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LRRC40Q9H9A6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms