Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 GTF2IP1-202ENST00000614592 2047 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC008522.1-201ENST00000639479 2906 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 Y_RNA.28-201ENST00000362554 111 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 Y_RNA.476-201ENST00000384347 108 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 RPL7P25-201ENST00000404151 721 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL513302.1-201ENST00000415679 428 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC234782.4-201ENST00000417646 1048 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 SLC35E1P1-201ENST00000419313 864 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 Z83313.1-201ENST00000433780 718 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL772284.1-201ENST00000443421 905 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC013399.1-201ENST00000450311 418 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 SBDSP1-204ENST00000453858 737 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 BTF3P15-201ENST00000455606 336 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC079193.1-201ENST00000460497 588 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC021205.1-201ENST00000468797 348 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC078785.3-201ENST00000476607 425 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC233702.1-201ENST00000482905 502 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC068587.1-201ENST00000483613 781 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 RN7SL283P-201ENST00000489055 303 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC244505.1-201ENST00000502642 307 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 OR7E85P-201ENST00000512164 985 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC113352.1-201ENST00000513196 666 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC022634.1-201ENST00000520765 532 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 SUB1P1-201ENST00000524415 382 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 MIR3167-201ENST00000579623 85 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 RPL26P30-202ENST00000602923 645 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC011468.4-201ENST00000603942 409 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 NUTF2P8-201ENST00000604593 363 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC090525.3-201ENST00000605601 189 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL354950.2-201ENST00000617939 290 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC018926.3-201ENST00000618841 406 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC022106.2-201ENST00000620114 757 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AC010332.1-201ENST00000620439 97 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 FLII-230ENST00000628188 156 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AL133216.2-202ENST00000634512 349 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 AP002765.1-201ENST00000528675 1507 ntBASIC7.5□□□□□ -1.21
USB1Q9BQ65 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USB1Q9BQ65 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
USB1Q9BQ65 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 486.6 ms