Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 AC099654.6-201ENST00000636487 512 ntBASIC8.14□□□□□ -1.11
PHOX2BQ99453 TPTEP1-208ENST00000636884 213 ntBASIC8.14□□□□□ -1.11
PHOX2BQ99453 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 AL359922.3-201ENST00000624779 1670 ntBASIC8.14□□□□□ -1.11
PHOX2BQ99453 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 AC006141.1-201ENST00000581917 2170 ntBASIC8.14□□□□□ -1.11
PHOX2BQ99453 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHOX2BQ99453 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.14□□□□□ -1.11
PHOX2BQ99453 AC078795.1-201ENST00000602342 3143 ntBASIC8.14□□□□□ -1.11
PHOX2BQ99453 AP000473.2-201ENST00000602659 1537 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 NMD3P1-201ENST00000439704 1488 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC010928.1-201ENST00000592477 1447 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 RNA5SP448-201ENST00000363151 111 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 SNORA63C-201ENST00000364578 129 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 MIR595-201ENST00000384905 96 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 MIR551B-201ENST00000384984 96 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RPS7P15-201ENST00000415804 584 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 MRPL50P2-201ENST00000416821 482 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC092634.6-201ENST00000418558 192 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 ELOCP4-201ENST00000420090 333 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RPL23AP4-201ENST00000427757 463 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 OR51AB1P-201ENST00000429046 620 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RPL31P35-201ENST00000431058 377 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 MTCO1P27-201ENST00000448269 226 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RNU6-261P-201ENST00000459506 102 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC008620.1-201ENST00000468453 592 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RN7SL549P-201ENST00000478997 282 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 RPL7AP26-201ENST00000488538 813 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 RNU6-277P-201ENST00000516272 106 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC130366.1-201ENST00000526505 1192 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 OR8A2P-201ENST00000528631 952 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC090424.1-201ENST00000535243 736 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC122134.1-201ENST00000565664 1104 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC005668.1-201ENST00000571142 476 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 OR7E94P-202ENST00000601375 790 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC019257.2-201ENST00000605539 497 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC090525.3-201ENST00000605601 189 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 MIR98-201ENST00000606724 119 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC012488.1-201ENST00000611221 640 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 AC135068.11-201ENST00000636378 921 ntBASIC8.13□□□□□ -1.11
PHOX2BQ99453 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PHOX2BQ99453 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHOX2BQ99453 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms