Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL021368.3-201ENST00000607119 578 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC018645.2-201ENST00000609151 472 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC079395.2-201ENST00000610982 737 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 uc_338.26-201ENST00000612659 160 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RN7SL544P-201ENST00000617232 284 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RN7SL763P-201ENST00000620922 284 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 MIR6719-201ENST00000622428 87 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 CCNT2P1-201ENST00000423082 1315 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
HMGB4Q8WW32 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 OR9K1P-201ENST00000326513 941 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 RNU6-792P-201ENST00000363490 107 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 RPL10P10-201ENST00000403509 664 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 ARL2BPP3-201ENST00000421226 480 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 HMGB3P24-201ENST00000433260 622 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 RAB28P2-201ENST00000454299 641 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC112187.1-201ENST00000455837 479 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 MTND6P32-201ENST00000457611 483 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 RN7SL352P-201ENST00000466002 277 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 SIAH1P1-201ENST00000479411 923 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC138866.2-201ENST00000508650 584 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 IGLV3-30-201ENST00000524362 298 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 OR6M2P-201ENST00000529831 871 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC027026.1-201ENST00000532323 742 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AP001804.2-201ENST00000533932 910 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 OSBPL9P3-201ENST00000534523 595 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AP003117.1-201ENST00000602771 554 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC015849.2-201ENST00000605738 409 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AL035661.1-201ENST00000620459 1144 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AL049777.1-201ENST00000622740 518 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 OR5AC4P-202ENST00000642086 985 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC123769.1-201ENST00000530992 3192 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 DDX18P6-201ENST00000450119 1997 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 DOCK11P1-201ENST00000553480 5932 ntBASIC5.96□□□□□ -1.46
HMGB4Q8WW32 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGB4Q8WW32 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL731556.1-201ENST00000394628 3711 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL035405.1-201ENST00000400795 710 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms