Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GAPDHP19-201ENST00000431768 1005 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC004890.1-201ENST00000461005 181 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL121769.1-201ENST00000469473 401 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 SETP11-201ENST00000473027 690 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC090543.1-201ENST00000492168 485 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC005178.1-201ENST00000508392 440 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 SUMO2P19-201ENST00000518920 295 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL121839.1-201ENST00000556233 1185 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC011260.1-201ENST00000578420 472 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC015688.2-201ENST00000584523 262 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL159169.3-201ENST00000608871 561 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL008582.1-201ENST00000609612 442 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AP002345.2-201ENST00000609961 904 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC079684.1-201ENST00000621405 437 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC120057.5-201ENST00000623840 154 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC068213.1-201ENST00000625124 226 ntBASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NEDD1Q8NHV4 AC017104.4-201ENST00000636283 1592 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 PPIAP24-201ENST00000328558 471 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RNA5SP65-201ENST00000363166 119 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 Y_RNA.256-201ENST00000364594 104 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 MIR191-201ENST00000384873 92 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RN7SKP146-201ENST00000410242 334 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 TCEA1P4-201ENST00000415066 844 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 NDUFA5P4-201ENST00000436704 385 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 COX7BP2-201ENST00000437976 242 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 COL11A2P1-205ENST00000441798 676 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 UBBP5-201ENST00000446970 266 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AL390728.3-201ENST00000452704 270 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 EIF4E2P2-201ENST00000492033 736 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC112198.1-201ENST00000505369 1220 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC138517.1-201ENST00000515724 568 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 OR4A17P-201ENST00000526032 904 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 OR7E10P-201ENST00000526420 991 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AP001804.1-201ENST00000526868 919 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AP003392.2-201ENST00000527269 208 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 AC012182.1-201ENST00000570133 895 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RN7SL199P-201ENST00000578752 281 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RN7SL656P-201ENST00000579044 281 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RN7SL270P-201ENST00000579643 281 ntBASIC7.88□□□□□ -1.15
NEDD1Q8NHV4 RN7SL404P-201ENST00000582421 281 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms