Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 USP9YP5-201ENST00000511770 630 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC011352.1-201ENST00000512300 793 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 SNORA19.3-201ENST00000516165 130 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 TPM3P3-201ENST00000521343 354 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC090819.1-201ENST00000523800 1111 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC027369.2-201ENST00000528030 440 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC105233.3-201ENST00000531125 744 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 FAM60CP-201ENST00000591086 664 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AL139344.1-201ENST00000605228 195 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AP005229.2-201ENST00000609980 697 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC005332.10-201ENST00000612725 619 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 CASC19-274ENST00000642018 970 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 THAP12P8-201ENST00000447914 2115 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 RBMY1HP-201ENST00000382759 1389 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 RNU105B-201ENST00000364478 208 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 RN7SKP28-201ENST00000364770 305 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 SNORA51.9-201ENST00000384295 124 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 MIR130B-202ENST00000385018 82 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 MIR513B-201ENST00000385136 84 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 MIR1302-8-201ENST00000408342 128 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 RPL5P2-201ENST00000429598 854 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 USP9YP24-201ENST00000434374 697 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 USP9YP17-201ENST00000444617 696 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 FTLP8-201ENST00000446770 267 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC093166.3-201ENST00000448785 303 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 NAP1L1P3-201ENST00000462291 880 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 OR9N1P-201ENST00000491296 333 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 SNORA81.2-201ENST00000516868 170 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC010476.1-201ENST00000519111 851 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL845552.1-201ENST00000556820 323 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 MTCYBP23-201ENST00000558717 1102 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL356801.1-201ENST00000559320 294 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC002519.2-203ENST00000567043 837 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC025588.2-201ENST00000604851 466 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL133507.1-201ENST00000605269 557 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms