Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 CHIAP3-201ENST00000423668 1133 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AL022237.1-201ENST00000446663 358 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 Z92846.1-201ENST00000456203 268 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 PPM1AP1-201ENST00000502740 1135 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 RN7SKP122-201ENST00000515923 296 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 RNA5SP400-201ENST00000517155 111 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 GCSHP4-201ENST00000538792 439 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 MIR6716-201ENST00000613413 80 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC067931.1-201ENST00000624190 671 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 DHX40P1-201ENST00000588725 1412 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC107980.1-201ENST00000558671 3355 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC068870.1-201ENST00000563737 2455 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 MRPS21P2-201ENST00000424704 264 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 MIR6830-201ENST00000636015 70 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 RNA5SP455-201ENST00000365190 119 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 RN7SKP100-201ENST00000411258 284 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 KNOP1P3-201ENST00000446933 426 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AL513533.1-201ENST00000453728 415 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 HMGB1P40-201ENST00000525121 540 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 OR4A40P-201ENST00000533878 948 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 AC006130.2-201ENST00000586202 326 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 MLECP1-201ENST00000615893 709 ntBASIC5.35□□□□□ -1.55
RIF1Q5UIP0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIF1Q5UIP0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 LINC01963-201ENST00000562038 3148 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 FAM3C2-201ENST00000312214 681 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 UBE2V1P14-201ENST00000415815 558 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 MIR5095-201ENST00000578844 88 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 RN7SL690P-201ENST00000582087 240 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 AC099494.2-201ENST00000623371 978 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 AC009831.5-201ENST00000624000 3189 ntBASIC5.34□□□□□ -1.55
RIF1Q5UIP0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIF1Q5UIP0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 RN7SKP149-201ENST00000363008 344 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 U3.22-201ENST00000391120 215 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 UBE2FP2-201ENST00000566646 462 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 AC053481.3-201ENST00000577881 843 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 AL021368.3-201ENST00000607119 578 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.34□□□□□ -1.56
RIF1Q5UIP0 THAP12P4-201ENST00000528321 2266 ntBASIC5.34□□□□□ -1.56
RIF1Q5UIP0 NXF4-202ENST00000416098 1465 ntBASIC5.33□□□□□ -1.56
RIF1Q5UIP0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms