Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC015908.1-201ENST00000478739 476 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 NPM1P17-201ENST00000479221 602 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 RPL29P23-201ENST00000486188 442 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC095052.1-201ENST00000509955 863 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 ZNF519P4-201ENST00000514008 125 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 IGHV3-63-201ENST00000518422 341 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AP001000.1-201ENST00000526843 742 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 OR4A43P-201ENST00000532938 908 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AL512310.9-201ENST00000553311 948 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC093510.2-201ENST00000562820 896 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC027216.1-201ENST00000577726 685 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AL163051.2-201ENST00000618976 735 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC090617.9-201ENST00000623751 147 ntBASIC6.18□□□□□ -1.42
CCDC38Q502W7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC38Q502W7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC38Q502W7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC38Q502W7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC38Q502W7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC38Q502W7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL359715.4-201ENST00000606629 1436 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 U3.10-201ENST00000364459 214 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL121878.1-201ENST00000418638 859 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AKR1B10P1-201ENST00000425765 942 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 RPSAP32-201ENST00000432681 526 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 PSMD10P2-201ENST00000432890 672 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 CUBNP2-201ENST00000443534 1139 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL512593.1-201ENST00000444758 779 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 RN7SL72P-201ENST00000460697 269 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC117394.1-201ENST00000477323 567 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC104629.1-201ENST00000494226 508 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 RN7SL649P-201ENST00000496974 275 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC093763.2-201ENST00000505334 1223 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 SNX18P25-201ENST00000510539 758 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 snoU109.5-201ENST00000516231 132 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC113192.3-201ENST00000529152 742 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC023158.1-201ENST00000561632 1025 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC106785.3-201ENST00000564064 847 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC120053.1-201ENST00000607706 736 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AL135786.2-201ENST00000608422 615 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC010325.3-201ENST00000641084 394 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC020656.2-201ENST00000613291 5309 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC079298.1-201ENST00000625026 1619 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 AC011933.2-201ENST00000578539 2790 ntBASIC6.17□□□□□ -1.42
CCDC38Q502W7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC38Q502W7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC38Q502W7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC38Q502W7 AC005224.3-201ENST00000584683 2140 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC38Q502W7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC38Q502W7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC38Q502W7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC38Q502W7 TAF9BP2-201ENST00000400856 499 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 RN7SKP146-201ENST00000410242 334 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 RN7SKP144-201ENST00000411108 279 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 AL445213.1-201ENST00000412589 747 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 AC245096.1-201ENST00000413104 546 ntBASIC6.16□□□□□ -1.42
CCDC38Q502W7 AL590806.1-201ENST00000415818 853 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms