Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC021106.1-201ENST00000509020 1058 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC091912.1-201ENST00000511351 248 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RNA5SP464-201ENST00000516251 108 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC139365.2-201ENST00000517972 253 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC009879.1-201ENST00000520029 839 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL358913.1-201ENST00000554342 121 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RPA2P1-201ENST00000556557 721 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL078601.3-201ENST00000573303 535 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 MIR4311-201ENST00000580794 100 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RN7SL230P-201ENST00000580835 303 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RN7SL66P-201ENST00000582099 264 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC090774.2-201ENST00000584708 322 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC107993.1-201ENST00000591343 684 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL512413.1-201ENST00000606489 382 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 MIR6809-201ENST00000612189 116 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC015819.1-201ENST00000613588 663 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 KARSP1-201ENST00000451871 1752 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC027088.4-201ENST00000611559 1947 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL513548.1-201ENST00000562904 1724 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 RNA5SP241-201ENST00000391326 114 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL096711.1-201ENST00000404780 554 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL357752.1-201ENST00000412817 349 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 PRUNEP1-201ENST00000425846 705 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 RPL7L1P1-201ENST00000448259 785 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 HMGB1P7-201ENST00000450921 612 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 RPS27P20-201ENST00000492051 246 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AL049874.2-201ENST00000492636 288 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC138409.2-202ENST00000507274 458 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AP006245.2-201ENST00000522004 300 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC002519.2-203ENST00000567043 837 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 MIR4776-2-201ENST00000580204 80 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC009237.13-201ENST00000603193 276 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 OR8G7P-201ENST00000616658 848 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC245014.3-201ENST00000618589 347 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.95□□□□□ -1.62
CCDC58Q4VC31 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC58Q4VC31 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 PDZK1P1-202ENST00000425209 1350 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 PSG10P-201ENST00000501199 1500 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AL022393.1-201ENST00000625142 1677 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms