Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
USP41Q3LFD5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 FBXL21-201ENST00000297158 1305 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 MIR105-2-201ENST00000385083 81 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AP000534.2-201ENST00000412729 568 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC009506.2-201ENST00000420635 840 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 OR5W1P-201ENST00000423705 938 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 RPL5P2-201ENST00000429598 854 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AL627308.1-201ENST00000435693 821 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 OR52Y1P-201ENST00000452418 828 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP41Q3LFD5 RPL35AP19-201ENST00000469425 329 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC100832.1-201ENST00000471945 383 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 OR2AO1P-201ENST00000476497 403 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC073610.1-201ENST00000489971 396 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 RN7SL547P-201ENST00000490793 290 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 RNU6-943P-201ENST00000516960 98 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AP001357.1-201ENST00000586304 1053 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 VN1R81P-201ENST00000602085 372 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC022387.2-201ENST00000604050 448 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC010245.2-201ENST00000606908 1167 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC018690.1-201ENST00000608144 626 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC021766.1-201ENST00000624404 741 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 THAP12P8-201ENST00000447914 2115 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 AL034546.1-201ENST00000623740 3693 ntBASIC6.1□□□□□ -1.43
USP41Q3LFD5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
USP41Q3LFD5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC114876.1-201ENST00000490962 1366 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 Y_RNA.62-201ENST00000362840 99 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL589994.1-201ENST00000404962 340 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 MRPS21P2-201ENST00000424704 264 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL590399.2-201ENST00000427536 309 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 TRIM60P13-201ENST00000432350 1283 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC096775.1-201ENST00000437724 448 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 OR7E116P-201ENST00000448529 957 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL513343.1-201ENST00000451818 792 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL606490.1-201ENST00000452266 765 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 RN7SL583P-201ENST00000475692 287 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 EIF1P7-201ENST00000487533 337 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP41Q3LFD5 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 OR5D2P-201ENST00000524390 911 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC126615.2-201ENST00000553003 515 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AC009268.1-201ENST00000561352 1203 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 MRPS21P7-201ENST00000566937 238 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 MIR1269B-201ENST00000580405 75 ntBASIC6.09□□□□□ -1.43
USP41Q3LFD5 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.09□□□□□ -1.43
USP41Q3LFD5 IMMP1LP3-201ENST00000604197 224 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms