Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDH1Q08174 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 MTND4P23-201ENST00000447723 1363 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 SPATA2P1-201ENST00000431223 2055 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 Y_RNA.70-201ENST00000362886 110 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 RNU6-621P-201ENST00000364752 109 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 snosnR66.1-201ENST00000391095 99 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AL590762.1-201ENST00000391782 432 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDH1Q08174 RNU2-5P-201ENST00000410533 180 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 Z97055.1-201ENST00000419730 712 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 OR5P4P-201ENST00000424698 917 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 MTCO1P54-201ENST00000430139 712 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 MTND3P21-201ENST00000433774 331 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC245452.2-201ENST00000435222 392 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 DNAJC19P4-201ENST00000440115 345 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC009237.4-201ENST00000441078 238 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 NANOGNBP1-201ENST00000448444 480 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 PRDX1P1-201ENST00000449329 596 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AL034399.1-201ENST00000451535 380 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 OR9M1P-201ENST00000459641 921 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 ENPP7P3-201ENST00000509123 241 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 PGAM4P2-201ENST00000512491 721 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 RN7SKP298-201ENST00000515950 94 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 Y_RNA.702-201ENST00000516843 96 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC018523.1-201ENST00000534211 512 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDH1Q08174 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 DPPA2P4-201ENST00000563717 878 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 RPSAP66-201ENST00000592196 606 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC015871.2-201ENST00000603605 948 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AC112230.1-201ENST00000604342 547 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 AL390816.3-201ENST00000604527 1066 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDH1Q08174 EIF3EP1-201ENST00000433978 1316 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
PCDH1Q08174 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDH1Q08174 AC005839.1-201ENST00000624148 3213 ntBASIC6.91□□□□□ -1.3
PCDH1Q08174 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PCDH1Q08174 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH1Q08174 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms