Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.19□□□□□ -1.26
COL16A1Q07092 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.19□□□□□ -1.26
COL16A1Q07092 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.19□□□□□ -1.26
COL16A1Q07092 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.19□□□□□ -1.26
COL16A1Q07092 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.19□□□□□ -1.26
COL16A1Q07092 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.19□□□□□ -1.26
COL16A1Q07092 AC022034.3-201ENST00000471393 478 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 AC058823.1-201ENST00000485315 474 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 HMGN2P25-201ENST00000486956 268 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.19□□□□□ -1.26
COL16A1Q07092 RNA5SP43-201ENST00000516559 110 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 SCARNA9-201ENST00000530422 353 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 OR7E128P-201ENST00000532736 1024 ntBASIC7.19□□□□□ -1.26
COL16A1Q07092 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
COL16A1Q07092 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
COL16A1Q07092 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.19□□□□□ -1.26
COL16A1Q07092 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL16A1Q07092 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 AC104118.1-201ENST00000607625 1589 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.18□□□□□ -1.26
COL16A1Q07092 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL16A1Q07092 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL16A1Q07092 SNORA48.7-201ENST00000391302 135 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 AC007568.1-201ENST00000422912 471 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 AC073143.1-201ENST00000436316 395 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 RPS17P5-201ENST00000498293 408 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.18□□□□□ -1.26
COL16A1Q07092 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.18□□□□□ -1.26
COL16A1Q07092 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.18□□□□□ -1.26
COL16A1Q07092 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 AL163952.1-202ENST00000569625 600 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 AL139041.1-201ENST00000605480 610 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 MIR6830-201ENST00000636015 70 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 CCDC162P-202ENST00000368966 6751 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL16A1Q07092 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL16A1Q07092 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.18□□□□□ -1.26
COL16A1Q07092 AC006206.1-201ENST00000544842 3387 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 AC006600.2-201ENST00000624834 2506 ntBASIC7.18□□□□□ -1.26
COL16A1Q07092 DHX40P1-201ENST00000588725 1412 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL16A1Q07092 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL16A1Q07092 MIR1182-201ENST00000408363 97 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.17□□□□□ -1.26
COL16A1Q07092 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.17□□□□□ -1.26
COL16A1Q07092 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.17□□□□□ -1.26
COL16A1Q07092 OR52J1P-201ENST00000450596 932 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.17□□□□□ -1.26
COL16A1Q07092 H3F3BP2-201ENST00000583907 357 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 AP005432.2-201ENST00000608162 586 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 AL121873.1-201ENST00000616013 524 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.17□□□□□ -1.26
COL16A1Q07092 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.17□□□□□ -1.26
COL16A1Q07092 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.17□□□□□ -1.26
COL16A1Q07092 KARSP3-201ENST00000571212 1504 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL16A1Q07092 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 MAPK10-371ENST00000641952 5209 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
COL16A1Q07092 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL16A1Q07092 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.17□□□□□ -1.26
COL16A1Q07092 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
COL16A1Q07092 RPL7P57-201ENST00000423238 740 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC011005.3-201ENST00000491624 395 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.16□□□□□ -1.26
COL16A1Q07092 RN7SKP260-201ENST00000516907 149 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC026688.1-201ENST00000520639 1168 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC084824.1-201ENST00000550917 1005 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.16□□□□□ -1.26
COL16A1Q07092 AL109766.1-201ENST00000555080 552 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms