Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 RPL23AP19-201ENST00000436229 369 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AL358876.1-201ENST00000453364 1075 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC108751.3-201ENST00000461814 1020 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC007998.1-201ENST00000474156 672 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC012123.2-201ENST00000485809 248 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC022826.1-201ENST00000519383 805 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AP000769.2-201ENST00000602344 396 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC108738.1-201ENST00000603703 237 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC100757.1-201ENST00000616872 1835 ntBASIC5.29□□□□□ -1.56
HMGCS1Q01581 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC015689.2-201ENST00000528172 1738 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 RNA5SP284-201ENST00000384547 118 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC009506.2-201ENST00000420635 840 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AL662874.1-201ENST00000426065 230 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC005297.1-201ENST00000444765 862 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 VDAC2P4-201ENST00000452925 711 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 RPS26P24-201ENST00000497656 331 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 SNORA43.3-201ENST00000517240 103 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 MRPS21P7-201ENST00000566937 238 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AP001496.3-201ENST00000580230 913 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 LSM1P2-201ENST00000604911 322 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC073869.8-201ENST00000641806 335 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AC114786.1-201ENST00000512892 1415 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 AL353796.1-201ENST00000561542 3241 ntBASIC5.28□□□□□ -1.56
HMGCS1Q01581 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS1Q01581 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS1Q01581 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 SNORA5.1-201ENST00000384275 131 ntBASIC5.27□□□□□ -1.57
HMGCS1Q01581 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGCS1Q01581 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS1Q01581 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms