Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 AL442128.2-201ENST00000620246 1824 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCNA1P78396 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCNA1P78396 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 SNORA67-201ENST00000384423 137 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 MIR550A3-201ENST00000390735 95 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC108075.1-201ENST00000424692 529 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 VN1R54P-201ENST00000435210 1049 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 AL445687.2-201ENST00000458156 728 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 RPS18P6-201ENST00000476880 458 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 RN7SL97P-201ENST00000486780 299 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNA1P78396 CDH12P4-201ENST00000517835 295 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 CDH12P3-201ENST00000517935 295 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 CDH12P1-201ENST00000518435 295 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNA1P78396 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNA1P78396 AP002505.2-201ENST00000623585 696 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.39□□□□□ -1.39
CCNA1P78396 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCNA1P78396 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCNA1P78396 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNA1P78396 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 AC131971.1-201ENST00000332881 1482 ntBASIC6.39□□□□□ -1.39
CCNA1P78396 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCNA1P78396 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 RNA5SP339-201ENST00000390987 122 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 AL009179.1-201ENST00000406085 265 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.38□□□□□ -1.39
CCNA1P78396 AC092106.1-201ENST00000444291 373 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.38□□□□□ -1.39
CCNA1P78396 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNA1P78396 TRBV5-2-201ENST00000489095 273 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNA1P78396 IGLV3-24-201ENST00000517477 197 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.38□□□□□ -1.39
CCNA1P78396 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNA1P78396 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.38□□□□□ -1.39
CCNA1P78396 MIR4646-201ENST00000580775 63 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNA1P78396 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNA1P78396 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNA1P78396 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNA1P78396 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNA1P78396 SNX18P3-202ENST00000565670 1750 ntBASIC6.38□□□□□ -1.39
CCNA1P78396 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNA1P78396 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNA1P78396 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.37□□□□□ -1.39
CCNA1P78396 AC005224.3-201ENST00000584683 2140 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CCNA1P78396 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCNA1P78396 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 RNA5SP305-201ENST00000362665 119 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCNA1P78396 AL451142.1-201ENST00000375867 775 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCNA1P78396 AL121835.1-201ENST00000404250 354 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 CRIP1P1-201ENST00000427567 185 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 DSTNP5-201ENST00000427921 523 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AL365220.1-201ENST00000432923 399 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 RPS11P7-201ENST00000442125 465 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.37□□□□□ -1.39
CCNA1P78396 AC135999.1-201ENST00000478962 479 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.37□□□□□ -1.39
CCNA1P78396 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.37□□□□□ -1.39
CCNA1P78396 SNRPCP2-201ENST00000504370 475 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AC078899.1-201ENST00000521432 1185 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 HMGB1P40-201ENST00000525121 540 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AP000676.2-201ENST00000529711 301 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 OR5D15P-201ENST00000531671 942 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.37□□□□□ -1.39
CCNA1P78396 MIR3691-201ENST00000578066 90 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AC018809.2-201ENST00000602436 3823 ntBASIC6.37□□□□□ -1.39
CCNA1P78396 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.37□□□□□ -1.39
CCNA1P78396 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.37□□□□□ -1.39
CCNA1P78396 Mico1.1-201ENST00000611698 204 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms