Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPS27AP6-201ENST00000427962 448 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AC144530.1-201ENST00000452862 555 ntBASIC6.27□□□□□ -1.41
COPB1P53618 SNORD125-201ENST00000459538 96 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AC099521.1-201ENST00000482557 334 ntBASIC6.27□□□□□ -1.41
COPB1P53618 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.27□□□□□ -1.41
COPB1P53618 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.27□□□□□ -1.41
COPB1P53618 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.27□□□□□ -1.41
COPB1P53618 PRMT5P1-201ENST00000514351 598 ntBASIC6.27□□□□□ -1.41
COPB1P53618 RN7SKP238-201ENST00000516483 249 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.27□□□□□ -1.41
COPB1P53618 AC009879.1-201ENST00000520029 839 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.27□□□□□ -1.41
COPB1P53618 AC096996.1-201ENST00000563813 325 ntBASIC6.27□□□□□ -1.41
COPB1P53618 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.27□□□□□ -1.41
COPB1P53618 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.27□□□□□ -1.41
COPB1P53618 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.27□□□□□ -1.41
COPB1P53618 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.27□□□□□ -1.41
COPB1P53618 AL671309.1-201ENST00000603750 544 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AC124916.2-201ENST00000604416 224 ntBASIC6.27□□□□□ -1.41
COPB1P53618 AC016957.2-201ENST00000616998 848 ntBASIC6.27□□□□□ -1.41
COPB1P53618 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.27□□□□□ -1.41
COPB1P53618 AC111152.1-202ENST00000635848 339 ntBASIC6.27□□□□□ -1.41
COPB1P53618 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 AP001157.1-201ENST00000550837 2339 ntBASIC6.27□□□□□ -1.41
COPB1P53618 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.27□□□□□ -1.41
COPB1P53618 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.27□□□□□ -1.41
COPB1P53618 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPB1P53618 AF287957.1-201ENST00000607368 1595 ntBASIC6.27□□□□□ -1.41
COPB1P53618 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.27□□□□□ -1.41
COPB1P53618 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.26□□□□□ -1.41
COPB1P53618 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.26□□□□□ -1.41
COPB1P53618 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.26□□□□□ -1.41
COPB1P53618 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 HSPA8P19-201ENST00000505359 1517 ntBASIC6.26□□□□□ -1.41
COPB1P53618 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COPB1P53618 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COPB1P53618 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COPB1P53618 AC007938.2-201ENST00000604666 2634 ntBASIC6.26□□□□□ -1.41
COPB1P53618 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 RNU6-925P-201ENST00000384629 104 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AL358178.1-201ENST00000407698 397 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 PNKDP1-201ENST00000435914 430 ntBASIC6.26□□□□□ -1.41
COPB1P53618 EIF5AP4-201ENST00000441206 465 ntBASIC6.26□□□□□ -1.41
COPB1P53618 OR52Y1P-201ENST00000452418 828 ntBASIC6.26□□□□□ -1.41
COPB1P53618 LDHBP2-201ENST00000456969 1005 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 AC098847.1-201ENST00000473094 348 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AP002884.1-201ENST00000479691 655 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 UGT2A3P7-201ENST00000510485 734 ntBASIC6.26□□□□□ -1.41
COPB1P53618 RNU6-760P-201ENST00000516078 97 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.26□□□□□ -1.41
COPB1P53618 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 AC006512.2-201ENST00000543250 486 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.26□□□□□ -1.41
COPB1P53618 AC006530.1-201ENST00000555980 571 ntBASIC6.26□□□□□ -1.41
COPB1P53618 RPA2P1-201ENST00000556557 721 ntBASIC6.26□□□□□ -1.41
COPB1P53618 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 AC002519.2-203ENST00000567043 837 ntBASIC6.26□□□□□ -1.41
COPB1P53618 MIR4776-2-201ENST00000580204 80 ntBASIC6.26□□□□□ -1.41
COPB1P53618 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.26□□□□□ -1.41
COPB1P53618 BNIP3P31-201ENST00000604515 566 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC108673.3-201ENST00000609183 335 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC092266.1-201ENST00000610958 165 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC104763.3-201ENST00000613765 618 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AC009269.6-201ENST00000621778 588 ntBASIC6.26□□□□□ -1.41
COPB1P53618 AL049777.1-201ENST00000622740 518 ntBASIC6.26□□□□□ -1.41
COPB1P53618 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.26□□□□□ -1.41
COPB1P53618 AC006206.1-201ENST00000544842 3387 ntBASIC6.26□□□□□ -1.41
COPB1P53618 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COPB1P53618 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.26□□□□□ -1.41
COPB1P53618 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.26□□□□□ -1.41
COPB1P53618 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPB1P53618 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.25□□□□□ -1.41
COPB1P53618 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPB1P53618 AC027088.4-201ENST00000611559 1947 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms