Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.06□□□□□ -1.12
RXRBP28702 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC8.06□□□□□ -1.12
RXRBP28702 AL049779.2-201ENST00000553847 315 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AC009094.1-201ENST00000564443 426 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AC015720.2-201ENST00000567709 334 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC8.06□□□□□ -1.12
RXRBP28702 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
RXRBP28702 SNX6P1-201ENST00000601728 1224 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC8.06□□□□□ -1.12
RXRBP28702 AC239868.4-201ENST00000608318 671 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AP000676.3-201ENST00000623299 569 ntBASIC8.06□□□□□ -1.12
RXRBP28702 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 AC008555.1-201ENST00000561778 2757 ntBASIC8.06□□□□□ -1.12
RXRBP28702 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RXRBP28702 AC012618.3-205ENST00000637896 1496 ntBASIC8.06□□□□□ -1.12
RXRBP28702 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 CASC19-228ENST00000641414 1684 ntBASIC8.05□□□□□ -1.12
RXRBP28702 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RXRBP28702 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 RPL23P2-201ENST00000320371 421 ntBASIC8.05□□□□□ -1.12
RXRBP28702 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 RNU6-792P-201ENST00000363490 107 ntBASIC8.05□□□□□ -1.12
RXRBP28702 Y_RNA.201-201ENST00000364052 96 ntBASIC8.05□□□□□ -1.12
RXRBP28702 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 AL035419.1-201ENST00000397037 564 ntBASIC8.05□□□□□ -1.12
RXRBP28702 MTND4LP20-201ENST00000402379 270 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AC016739.1-201ENST00000405359 345 ntBASIC8.05□□□□□ -1.12
RXRBP28702 METTL15P3-201ENST00000415522 1221 ntBASIC8.05□□□□□ -1.12
RXRBP28702 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 MTCYBP39-201ENST00000437562 491 ntBASIC8.05□□□□□ -1.12
RXRBP28702 PA2G4P6-201ENST00000438325 1197 ntBASIC8.05□□□□□ -1.12
RXRBP28702 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 AL031667.1-201ENST00000440222 725 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AC005297.1-201ENST00000444765 862 ntBASIC8.05□□□□□ -1.12
RXRBP28702 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 NAP1L1P3-201ENST00000462291 880 ntBASIC8.05□□□□□ -1.12
RXRBP28702 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 AC055733.3-201ENST00000505214 523 ntBASIC8.05□□□□□ -1.12
RXRBP28702 SUMO2P5-201ENST00000506790 245 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 AP001922.4-201ENST00000526967 290 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.05□□□□□ -1.12
RXRBP28702 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 AC130448.2-201ENST00000624082 374 ntBASIC8.05□□□□□ -1.12
RXRBP28702 AC005609.4-201ENST00000625071 447 ntBASIC8.05□□□□□ -1.12
RXRBP28702 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RXRBP28702 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.05□□□□□ -1.12
RXRBP28702 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
RXRBP28702 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RXRBP28702 AC011379.1-201ENST00000508713 3025 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AL049634.1-201ENST00000453770 1720 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC025809.2-201ENST00000625085 1802 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RXRBP28702 RN7SKP77-201ENST00000363261 353 ntBASIC8.04□□□□□ -1.12
RXRBP28702 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC8.04□□□□□ -1.12
RXRBP28702 SNORD116-9-201ENST00000384000 95 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SNORD116-3-201ENST00000384287 95 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SNORD116-7-201ENST00000384404 95 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SNORD116-5-201ENST00000384462 95 ntBASIC8.04□□□□□ -1.12
RXRBP28702 MIR513B-201ENST00000385136 84 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms