Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 OR4K12P-201ENST00000406538 961 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AC211486.3-201ENST00000412694 621 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A1P20908 TPT1P12-201ENST00000448968 492 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AC079080.1-201ENST00000479841 822 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.27□□□□□ -1.57
COL5A1P20908 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.27□□□□□ -1.57
COL5A1P20908 AC018558.5-201ENST00000565840 952 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AC060766.1-201ENST00000590824 627 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.27□□□□□ -1.57
COL5A1P20908 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A1P20908 HIRAP1-201ENST00000605318 787 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AC245389.2-201ENST00000616023 576 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 AC242843.1-201ENST00000618702 573 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL5A1P20908 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL5A1P20908 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A1P20908 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.27□□□□□ -1.57
COL5A1P20908 AL355488.2-201ENST00000609909 2850 ntBASIC5.27□□□□□ -1.57
COL5A1P20908 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A1P20908 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A1P20908 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A1P20908 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A1P20908 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A1P20908 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL5A1P20908 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 AC010132.2-201ENST00000295493 1043 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 GNG5P2-201ENST00000372054 207 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 MIR23A-201ENST00000385245 73 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL5A1P20908 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 DDX39BP1-205ENST00000422507 192 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 AC093655.2-201ENST00000425735 631 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.26□□□□□ -1.57
COL5A1P20908 RPS29P33-201ENST00000456717 146 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.26□□□□□ -1.57
COL5A1P20908 AC008897.1-201ENST00000494006 347 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 RPL37AP8-201ENST00000494116 276 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.26□□□□□ -1.57
COL5A1P20908 AC021106.1-201ENST00000509020 1058 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 AC137627.1-201ENST00000545761 289 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 H3F3BP2-201ENST00000583907 357 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 AC011447.4-201ENST00000587562 111 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 AL133406.3-201ENST00000606817 541 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
COL5A1P20908 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
COL5A1P20908 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL5A1P20908 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.26□□□□□ -1.57
COL5A1P20908 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.26□□□□□ -1.57
COL5A1P20908 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.26□□□□□ -1.57
COL5A1P20908 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 AC016745.2-201ENST00000608834 3443 ntBASIC5.26□□□□□ -1.57
COL5A1P20908 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A1P20908 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL5A1P20908 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.25□□□□□ -1.57
COL5A1P20908 RN7SKP126-201ENST00000411143 300 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AL451063.1-201ENST00000450164 1133 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 RAB9BP1-201ENST00000519581 626 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.25□□□□□ -1.57
COL5A1P20908 AC209154.1-201ENST00000582156 337 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC091905.4-201ENST00000623432 202 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
COL5A1P20908 AL158152.1-201ENST00000602652 1435 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 KYNUP3-201ENST00000574386 1341 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 AC002090.1-201ENST00000625000 2138 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL5A1P20908 AC126755.2-208ENST00000327792 462 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC138969.1-213ENST00000331436 462 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AL590399.2-201ENST00000427536 309 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 C4BPAP2-201ENST00000428434 478 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC011753.3-201ENST00000443436 406 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL5A1P20908 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms