Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 LYPLA1P3-201ENST00000402650 695 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 CDY8P-201ENST00000428380 1279 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 HSPD1P12-201ENST00000429127 1069 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 CDY20P-201ENST00000447528 1279 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC021106.1-201ENST00000509020 1058 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC005726.4-201ENST00000582858 458 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 MIR4260-201ENST00000583107 67 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AL139041.1-201ENST00000605480 610 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 OR8G3P-202ENST00000641572 1255 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC073136.1-201ENST00000449426 2884 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RNU1-150P-201ENST00000362491 162 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 OR1L6-202ENST00000373684 1044 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 SNORD56.6-201ENST00000384569 71 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 PPIAP9-201ENST00000403866 498 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL357752.1-201ENST00000412817 349 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 COX5BP7-201ENST00000414780 274 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 PCNPP4-201ENST00000414817 517 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL035660.1-201ENST00000422041 222 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 KCTD9P1-201ENST00000430462 1167 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 GAPDHP48-201ENST00000436626 961 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC114982.2-201ENST00000461396 358 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RN7SL570P-201ENST00000484405 292 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RNU6-964P-201ENST00000516524 69 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 OR8A2P-201ENST00000528631 952 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC040958.1-201ENST00000561102 201 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC096996.1-201ENST00000563813 325 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 MTCYBP13-201ENST00000578634 1093 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC009237.13-201ENST00000603193 276 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RPL12P48-201ENST00000605620 304 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL365181.4-201ENST00000609800 547 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL096712.1-201ENST00000614561 159 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AC129915.3-201ENST00000634128 948 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AL138820.1-201ENST00000617901 5305 ntBASIC4.94□□□□□ -1.62
HLA-DPB1P04440 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPB1P04440 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 TRIM51GP-201ENST00000534741 1350 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC100757.1-201ENST00000616872 1835 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms