Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC068522.1-201ENST00000482895 345 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 RPS7P6-201ENST00000485777 579 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC078899.1-201ENST00000521432 1185 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC018552.1-201ENST00000562099 811 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 H3F3BP2-201ENST00000583907 357 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 AC006115.2-201ENST00000596823 202 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.97□□□□□ -1.45
TIMP1P01033 AC091905.4-201ENST00000623432 202 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TIMP1P01033 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TIMP1P01033 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TIMP1P01033 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.97□□□□□ -1.45
TIMP1P01033 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TIMP1P01033 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TIMP1P01033 ZNF812P-201ENST00000457674 1694 ntBASIC5.97□□□□□ -1.45
TIMP1P01033 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TIMP1P01033 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.97□□□□□ -1.45
TIMP1P01033 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TIMP1P01033 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.96□□□□□ -1.45
TIMP1P01033 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TIMP1P01033 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.96□□□□□ -1.45
TIMP1P01033 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
TIMP1P01033 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TIMP1P01033 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TIMP1P01033 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TIMP1P01033 AC114876.1-201ENST00000490962 1366 ntBASIC5.96□□□□□ -1.45
TIMP1P01033 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TIMP1P01033 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TIMP1P01033 RNVU1-6-201ENST00000364688 164 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 MIR192-201ENST00000384915 110 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 OR4K12P-201ENST00000406538 961 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 AL451063.1-201ENST00000450164 1133 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.96□□□□□ -1.46
TIMP1P01033 RN7SL591P-201ENST00000496150 292 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 AL163952.1-202ENST00000569625 600 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 EIF3FP1-201ENST00000613970 806 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.96□□□□□ -1.46
TIMP1P01033 AP004289.1-201ENST00000436307 2205 ntBASIC5.96□□□□□ -1.46
TIMP1P01033 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.96□□□□□ -1.46
TIMP1P01033 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
TIMP1P01033 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TIMP1P01033 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.96□□□□□ -1.46
TIMP1P01033 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.96□□□□□ -1.46
TIMP1P01033 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TIMP1P01033 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TIMP1P01033 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TIMP1P01033 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.95□□□□□ -1.46
TIMP1P01033 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 AC005224.3-201ENST00000584683 2140 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TIMP1P01033 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 SNORA11-201ENST00000408789 128 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TIMP1P01033 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 GAPDHP25-201ENST00000447061 1001 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 snoU13.20-201ENST00000459180 104 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 EIF3KP3-201ENST00000514461 639 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 PMS2P3-207ENST00000529061 717 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 DHFRP1-201ENST00000579682 559 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 AC011487.3-201ENST00000593607 453 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.95□□□□□ -1.46
TIMP1P01033 OR7A8P-201ENST00000595427 913 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.95□□□□□ -1.46
TIMP1P01033 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 MIR7641-1-201ENST00000627518 61 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 AC020656.2-201ENST00000613291 5309 ntBASIC5.95□□□□□ -1.46
TIMP1P01033 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TIMP1P01033 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TIMP1P01033 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.95□□□□□ -1.46
TIMP1P01033 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TIMP1P01033 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TIMP1P01033 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.94□□□□□ -1.46
TIMP1P01033 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms