Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU1-49P-201ENST00000363468 159 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.37□□□□□ -1.55
CLPTM1O96005 GCNT1P4-201ENST00000404096 329 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 DHFRP5-201ENST00000406944 564 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 RN7SKP108-201ENST00000411367 328 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 ARAFP2-201ENST00000440565 559 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 RAD1P2-201ENST00000446414 663 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC006539.1-201ENST00000481419 501 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 RPL38P3-201ENST00000484463 213 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC108103.1-201ENST00000511286 446 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC021193.1-201ENST00000511607 420 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 HNRNPRP2-201ENST00000528421 743 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC127381.1-201ENST00000555979 939 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC135626.1-201ENST00000556983 435 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC008555.7-201ENST00000605008 583 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 SNORA35B-201ENST00000607417 129 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC010998.3-201ENST00000613871 631 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 CASC19-274ENST00000642018 970 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLPTM1O96005 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 EIF3EP1-201ENST00000433978 1316 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 MTCO1P22-201ENST00000604619 1360 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLPTM1O96005 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 SOCS5P3-201ENST00000425115 1576 ntBASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.37□□□□□ -1.55
CLPTM1O96005 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.37□□□□□ -1.55
CLPTM1O96005 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLPTM1O96005 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLPTM1O96005 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 TET1P1-201ENST00000426627 2301 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLPTM1O96005 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLPTM1O96005 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 RN7SKP78-201ENST00000364711 318 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 RN7SKP187-201ENST00000365536 330 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.36□□□□□ -1.55
CLPTM1O96005 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLPTM1O96005 HSPE1P16-201ENST00000426640 348 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 VN1R21P-201ENST00000426703 765 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 PSMD10P2-201ENST00000432890 672 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 PPIAP10-201ENST00000438675 458 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AL512593.1-201ENST00000444758 779 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.36□□□□□ -1.55
CLPTM1O96005 MTND6P5-201ENST00000448266 512 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC093166.3-201ENST00000448785 303 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 HMGB1P7-201ENST00000450921 612 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 HIGD1AP16-201ENST00000450986 258 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AP002371.1-201ENST00000463604 433 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 RPL34P33-201ENST00000486062 334 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AP002453.1-201ENST00000492327 668 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 RPL37P23-201ENST00000492641 294 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AC122718.2-201ENST00000505325 591 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC091874.2-201ENST00000505889 720 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC098976.1-201ENST00000513014 541 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 MAST4-IT1-201ENST00000514241 658 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 Y_RNA.710-201ENST00000516975 110 ntBASIC5.36□□□□□ -1.55
CLPTM1O96005 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.36□□□□□ -1.55
CLPTM1O96005 AC036111.2-201ENST00000533247 901 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms