Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC068446.1-201ENST00000556425 1549 ntBASIC2.33□□□□□ -2.04
USH2AO75445 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 THAP12P9-201ENST00000503971 2360 ntBASIC2.33□□□□□ -2.04
USH2AO75445 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USH2AO75445 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 MRPS21P2-201ENST00000424704 264 ntBASIC2.33□□□□□ -2.04
USH2AO75445 YME1L1P1-201ENST00000429435 297 ntBASIC2.33□□□□□ -2.04
USH2AO75445 RN7SL814P-201ENST00000487715 300 ntBASIC2.33□□□□□ -2.04
USH2AO75445 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 HNRNPCP4-201ENST00000571636 900 ntBASIC2.33□□□□□ -2.04
USH2AO75445 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 AC099654.2-201ENST00000433031 1980 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AC006600.2-201ENST00000624834 2506 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AC010478.1-201ENST00000601500 6762 ntBASIC2.33□□□□□ -2.04
USH2AO75445 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USH2AO75445 OR4K17-201ENST00000315543 1032 ntBASIC2.32□□□□□ -2.04
USH2AO75445 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 MIR298-201ENST00000401212 88 ntBASIC2.32□□□□□ -2.04
USH2AO75445 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC2.32□□□□□ -2.04
USH2AO75445 AC007016.1-201ENST00000512110 244 ntBASIC2.32□□□□□ -2.04
USH2AO75445 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
USH2AO75445 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.32□□□□□ -2.04
USH2AO75445 MEMO1P5-201ENST00000604810 406 ntBASIC2.32□□□□□ -2.04
USH2AO75445 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 AC233968.1-201ENST00000611212 1300 ntBASIC2.32□□□□□ -2.04
USH2AO75445 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USH2AO75445 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 AP002364.1-201ENST00000623330 3386 ntBASIC2.32□□□□□ -2.04
USH2AO75445 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
USH2AO75445 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 IARS-213ENST00000627121 4587 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 AC016251.2-201ENST00000623393 3089 ntBASIC2.32□□□□□ -2.04
USH2AO75445 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 LINC01616-201ENST00000561816 2280 ntBASIC2.32□□□□□ -2.04
USH2AO75445 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 AL731534.1-201ENST00000434711 269 ntBASIC2.32□□□□□ -2.04
USH2AO75445 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 RPS3AP12-201ENST00000443616 753 ntBASIC2.32□□□□□ -2.04
USH2AO75445 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.32□□□□□ -2.04
USH2AO75445 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC2.32□□□□□ -2.04
USH2AO75445 AC021422.1-201ENST00000621212 473 ntBASIC2.32□□□□□ -2.04
USH2AO75445 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC2.32□□□□□ -2.04
USH2AO75445 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USH2AO75445 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
USH2AO75445 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USH2AO75445 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms