Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC006116.6-201ENST00000593258 1103 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC025946.2-201ENST00000603398 234 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 RNF138P2-201ENST00000603490 592 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL139123.1-201ENST00000612008 430 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 pRNA.9-201ENST00000618609 89 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL035661.1-201ENST00000620459 1144 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC127071.2-201ENST00000623293 527 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 Z73965.1-201ENST00000623412 2297 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 IRF5P1-201ENST00000504852 2164 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092701.1-201ENST00000623627 1551 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SKP104-201ENST00000362605 328 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU1-19P-201ENST00000363306 165 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 MRRF-207ENST00000373729 870 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC007068.1-201ENST00000396690 844 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SKP30-201ENST00000411373 334 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL7P56-201ENST00000429441 717 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 PRPS1P2-201ENST00000430496 937 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 EMC3-AS1-205ENST00000438698 534 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 SRP68P2-201ENST00000456184 254 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL445433.1-201ENST00000457507 257 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 ANK3-213ENST00000486349 493 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 B3GNTL1P1-201ENST00000509174 289 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RFPL4AP3-201ENST00000515267 345 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC130366.1-201ENST00000526505 1192 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 PSMC1P8-201ENST00000536820 1296 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 CCL2-202ENST00000580907 736 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC245052.7-201ENST00000601161 359 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004805.3-201ENST00000603178 310 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC073046.2-201ENST00000604756 527 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC026979.4-201ENST00000606555 645 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC078899.5-201ENST00000612475 178 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms