Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AL450345.1-202ENST00000605741 3881 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC011755.1-201ENST00000623763 2049 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 OR7E101P-201ENST00000400428 513 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 RNA5SP431-201ENST00000410312 120 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 COX5BP7-201ENST00000414780 274 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AL450023.1-201ENST00000450868 751 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 RPS12P31-201ENST00000491419 398 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 EIF3KP3-201ENST00000514461 639 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC040958.1-201ENST00000561102 201 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 AC024884.1-201ENST00000620583 399 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM49D1C9J1S8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AL353796.1-201ENST00000561542 3241 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 SUGT1P2-201ENST00000379452 992 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 OOSP1-201ENST00000398992 1270 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 OR6D1P-201ENST00000436165 939 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 VDAC2P4-201ENST00000452925 711 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC118758.1-202ENST00000454719 225 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC245028.2-201ENST00000458673 253 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 EIF3LP3-201ENST00000495197 822 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 MYL12BP2-201ENST00000503948 512 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 SNORA70.20-201ENST00000516848 126 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC127024.5-201ENST00000580085 462 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 MIR7109-201ENST00000613748 65 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AL591926.1-201ENST00000620542 217 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 AP001052.1-201ENST00000626421 99 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 TRIM51GP-201ENST00000534741 1350 ntBASIC5.42□□□□□ -1.54
TRIM49D1C9J1S8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 AC079298.1-201ENST00000625026 1619 ntBASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM49D1C9J1S8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms