Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 RNF10P1-201ENST00000418589 369 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 RPL24P2-201ENST00000421023 475 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 BX276092.6-201ENST00000430476 250 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AL596266.1-201ENST00000448132 400 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 BX276092.8-201ENST00000455722 250 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC011476.1-201ENST00000466725 307 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 DUTP7-201ENST00000507982 486 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC006499.4-201ENST00000510947 694 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 SNORA81.2-201ENST00000516868 170 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 MRPS16P1-201ENST00000523462 412 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 VN1R81P-201ENST00000602085 372 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC067773.1-201ENST00000603284 1094 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 MIR6071-201ENST00000616741 78 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 RN7SL544P-201ENST00000617232 284 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 RN7SL763P-201ENST00000620922 284 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 AC087516.1-201ENST00000561236 2428 ntBASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.96□□□□□ -1.46
TCRBV5S1A1TA0A578 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL034546.1-201ENST00000623740 3693 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL449283.1-201ENST00000602631 3403 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL121886.1-201ENST00000358609 435 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 RN7SKP185-201ENST00000362813 326 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC245060.4-201ENST00000413293 1121 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 RCC2P2-201ENST00000422174 918 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL022331.1-201ENST00000429025 477 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 HMGN1P2-201ENST00000445197 310 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AP006222.1-205ENST00000450734 457 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 MEMO1P4-201ENST00000453590 386 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC112184.1-201ENST00000505179 312 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 RNA5SP271-201ENST00000516700 88 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 RN7SKP5-201ENST00000517045 272 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC092121.1-201ENST00000569452 202 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC015802.2-201ENST00000589690 189 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC005618.4-201ENST00000625053 554 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 AC004808.1-201ENST00000627671 721 ntBASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV5S1A1TA0A578 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 WDR95P-201ENST00000425638 1542 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms