Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 RN7SKP74-201ENST00000362849 309 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 CTSL3P-202ENST00000412179 788 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 GAPDHP48-201ENST00000436626 961 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC012512.1-201ENST00000446594 718 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC114982.2-201ENST00000461396 358 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 RPS3AP15-201ENST00000483874 781 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 RPS7P6-201ENST00000485777 579 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 IGLV3-24-201ENST00000517477 197 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 IGBP1P1-201ENST00000554337 1009 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AGGF1P7-201ENST00000562369 913 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 MIR4433B-201ENST00000581329 102 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC063977.5-201ENST00000601044 974 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AL139124.1-201ENST00000609123 421 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AC026367.3-201ENST00000619032 590 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 SAMMSON-227ENST00000642114 1199 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 THAP12P5-201ENST00000405864 2275 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 NR1H5P-201ENST00000452683 1377 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MIR130A-201ENST00000385274 89 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 OOSP1-201ENST00000398992 1270 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 RNU6-233P-201ENST00000410845 141 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC096921.1-201ENST00000411661 375 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 GNG5P5-201ENST00000420444 220 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AL138899.2-201ENST00000439139 499 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 LINC02210-201ENST00000444561 288 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 LRRC37A14P-201ENST00000452297 462 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC084754.1-201ENST00000463466 464 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 RPSAP37-201ENST00000470913 821 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 RPL32P33-201ENST00000487023 394 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC006499.4-201ENST00000510947 694 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 IGLV3-30-201ENST00000524362 298 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 NMNAT1P5-201ENST00000559657 841 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 MIR3936-201ENST00000584304 110 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 BRAFP1-201ENST00000445336 2703 ntBASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAPPC4Q9Y296 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms