Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 PMCHL1-202ENST00000423102 261 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC093698.1-201ENST00000423843 571 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 MTCYBP10-201ENST00000424905 650 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AL627308.1-201ENST00000435693 821 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC234771.3-201ENST00000454984 622 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 RN7SL58P-201ENST00000473445 294 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 OR7E83P-201ENST00000511021 970 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 SNORA81.2-201ENST00000516868 170 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-988P-201ENST00000519081 107 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 SNX18P27-201ENST00000523611 779 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC087241.2-201ENST00000535801 324 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC008147.3-201ENST00000548666 354 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 CNTNAP3P1-201ENST00000616657 906 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 RN7SL680P-201ENST00000620379 299 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZNF734P-201ENST00000419494 1534 ntBASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC9.92□□□□□ -0.82
TRIM35Q9UPQ4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC023818.2-201ENST00000623817 2304 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AP002991.2-201ENST00000623807 2801 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 Y_RNA.31-201ENST00000362574 102 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MIR498-201ENST00000385134 124 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-316P-201ENST00000391027 107 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CREM-214ENST00000395887 849 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MIR548I2-201ENST00000408348 149 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 LYPLA1P1-201ENST00000434514 622 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 RPL7P11-201ENST00000437586 658 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AL392103.1-201ENST00000447000 198 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 RPL23AP20-201ENST00000447965 421 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 XACT-201ENST00000468762 497 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 GAPDHP38-201ENST00000503632 1002 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 UGT2A3P7-201ENST00000510485 734 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AP000889.2-201ENST00000532684 490 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC006924.1-201ENST00000610750 559 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 CASC19-212ENST00000641153 1287 ntBASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TRIM35Q9UPQ4 KYNUP1-201ENST00000466683 1406 ntBASIC9.9□□□□□ -0.82
TRIM35Q9UPQ4 LRRC2-AS1-201ENST00000599511 2291 ntBASIC9.9□□□□□ -0.82
TRIM35Q9UPQ4 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms