Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 RNU6-1227P-201ENST00000383981 107 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 SNORA7B-201ENST00000384360 139 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 Y_RNA.529-201ENST00000384586 119 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 PTMAP8-201ENST00000397729 342 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 RPS3AP36-201ENST00000398190 775 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC113608.1-201ENST00000398740 305 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL139128.1-201ENST00000413921 941 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 MICG-208ENST00000416822 132 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL359633.1-201ENST00000421403 310 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC127526.2-201ENST00000426436 775 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL035410.1-201ENST00000427409 427 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 KCTD9P3-201ENST00000434597 1169 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL512882.1-201ENST00000436086 832 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 BMS1P10-201ENST00000443754 1120 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 GAPDHP17-201ENST00000449858 1001 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 SNRPGP6-201ENST00000451124 220 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 OR6K1P-201ENST00000456766 971 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 SULT1D1P-201ENST00000458020 882 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC114981.1-201ENST00000503897 678 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 ZNF322P1-201ENST00000568013 1209 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC108451.2-201ENST00000603875 538 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 BNIP3P10-201ENST00000605360 577 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 DLEU1_2.1-201ENST00000617920 342 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 XRCC6P5-201ENST00000435236 1795 ntBASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIMD1Q9UGP4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 UGT2B26P-201ENST00000508672 1613 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC079097.1-201ENST00000512187 1399 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC138915.3-201ENST00000562908 1389 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 Y_RNA.1-201ENST00000352915 104 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 RNA5SP396-201ENST00000364834 120 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 FCF1P1-201ENST00000432690 571 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 RPL7P11-201ENST00000437586 658 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 GCNT1P5-201ENST00000449274 682 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AL590365.1-201ENST00000450788 243 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 MRPS21P1-201ENST00000453850 223 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 OR7E7P-201ENST00000455678 1012 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 OR7E62P-201ENST00000456741 477 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 NF1P3-201ENST00000457709 450 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC112225.1-201ENST00000508230 297 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 Y_RNA.704-201ENST00000516851 102 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
LIMD1Q9UGP4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms