Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC097463.1-201ENST00000447288 481 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 HIGD1AP16-201ENST00000450986 258 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 SEPT7P3-201ENST00000455017 621 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC096741.1-201ENST00000472250 846 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 RBBP4P1-201ENST00000502424 1276 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 NPM1P27-201ENST00000502784 830 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 OR7E99P-201ENST00000505750 922 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 IGLVIV-64-201ENST00000518581 301 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC010476.1-201ENST00000519111 851 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 MTND1P6-201ENST00000523621 946 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC138701.1-201ENST00000524329 714 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC084337.1-201ENST00000524809 686 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AP003066.2-201ENST00000529375 555 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AP000662.1-201ENST00000530952 487 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC007346.1-201ENST00000569208 867 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 MIR4675-201ENST00000577898 77 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 MIR4701-201ENST00000583094 63 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AP001823.1-201ENST00000604056 1003 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC074140.1-201ENST00000621617 208 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC007342.8-201ENST00000623278 678 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 AC007996.1-201ENST00000620414 2821 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.77□□□□□ -1.49
LRFN1Q9P244 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
LRFN1Q9P244 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRFN1Q9P244 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 CCT8P1-201ENST00000413611 1657 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 LYARP1-201ENST00000436977 1501 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 FAM32BP-201ENST00000344033 333 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AP002784.2-201ENST00000397300 549 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL355615.1-201ENST00000406187 641 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC023128.2-201ENST00000420880 1223 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 RPS7P14-201ENST00000426405 583 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 RPS4XP16-201ENST00000427198 791 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 DNAJA1P5-201ENST00000440278 943 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC097499.1-201ENST00000444277 208 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 VPS25P1-201ENST00000455691 508 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 RPS17P11-201ENST00000474297 293 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 TPT1P3-201ENST00000492841 512 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 RN7SKP157-201ENST00000516174 282 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 RN7SKP35-201ENST00000517210 151 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AP000619.2-201ENST00000546014 969 ntBASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.76□□□□□ -1.49
LRFN1Q9P244 AC092332.1-201ENST00000563684 829 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms