Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 PPIAP24-201ENST00000328558 471 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 SNORA7A-201ENST00000384765 139 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RN7SKP188-201ENST00000410789 317 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AF274854.1-201ENST00000413236 615 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC013410.1-201ENST00000436223 1232 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 NPM1P33-201ENST00000438918 872 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 MTND4P25-201ENST00000441039 533 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 PMS2P9-201ENST00000441237 515 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AL031681.1-201ENST00000443304 400 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RPL31P20-201ENST00000449593 360 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RPSAP24-201ENST00000461543 873 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC092754.2-201ENST00000463506 460 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RPL19P11-201ENST00000495944 589 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 HMGB1P3-201ENST00000502802 616 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RPF2P2-201ENST00000504693 896 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 FABP5P12-201ENST00000515543 389 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 MRPS5P3-201ENST00000515577 166 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RPL12P22-201ENST00000519073 490 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 IGLV3-6-201ENST00000523937 250 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC092718.4-201ENST00000566639 716 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 MIR4732-201ENST00000581873 76 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 MIR4801-201ENST00000582704 82 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 SYPL1P2-201ENST00000582878 727 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC015802.2-201ENST00000589690 189 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC024060.1-201ENST00000607052 494 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AP003789.1-201ENST00000617737 605 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AP000550.3-201ENST00000637734 379 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 AC105114.1-201ENST00000624795 1862 ntBASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PARPBPQ9NWS1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC022034.1-201ENST00000512867 2156 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC008432.1-201ENST00000615912 1320 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 OR2M1P-201ENST00000318104 951 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 RNA5SP188-201ENST00000362916 129 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC245036.1-201ENST00000391727 309 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AL021407.1-201ENST00000404531 386 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 NUDT19P3-201ENST00000404698 555 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 GPN3P1-201ENST00000423883 535 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 BX119904.1-201ENST00000432026 348 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC003989.1-201ENST00000434569 565 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 ISCA1P2-201ENST00000438679 421 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 COL11A2P1-205ENST00000441798 676 ntBASIC5.84□□□□□ -1.47
PARPBPQ9NWS1 BMI1P1-201ENST00000445879 941 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms