Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AP005403.1-201ENST00000579720 229 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC003973.3-201ENST00000624863 2822 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RNA5SP284-201ENST00000384547 118 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 DBIP1-201ENST00000401435 260 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 MTND6P12-201ENST00000428247 522 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RPL23AP19-201ENST00000436229 369 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC002504.1-201ENST00000438281 691 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC073109.1-201ENST00000445066 978 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ABCC13-202ENST00000463099 3842 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC130364.2-201ENST00000528639 604 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 OR8G3P-201ENST00000533406 921 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 RBM22P12-201ENST00000567098 1255 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC008115.3-201ENST00000614874 549 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC007683.2-201ENST00000624681 714 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 AC068870.3-201ENST00000625077 2536 ntBASIC5.47□□□□□ -1.53
TREX1Q9NSU2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.47□□□□□ -1.53
TREX1Q9NSU2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TREX1Q9NSU2 AP001029.2-203ENST00000589795 4910 ntBASIC5.46□□□□□ -1.53
TREX1Q9NSU2 RN7SKP28-201ENST00000364770 305 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 IPPKP1-201ENST00000422501 768 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC090589.1-201ENST00000473109 362 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 IGBP1P4-201ENST00000503202 879 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC109464.1-201ENST00000511091 819 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC021193.1-201ENST00000511607 420 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AL049872.1-201ENST00000556323 322 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC135626.1-201ENST00000556983 435 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms