Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VTA1Q9NP79 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC090220.1-201ENST00000593078 1699 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 RN7SKP128-201ENST00000364270 303 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC016739.1-201ENST00000405359 345 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 RN7SKP293-201ENST00000411389 296 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 PTP4A1P7-201ENST00000423476 514 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC115285.1-201ENST00000424879 736 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 RPS26P41-201ENST00000450370 284 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC092691.2-201ENST00000461787 803 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 TPT1P3-201ENST00000492841 512 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC112191.2-201ENST00000522428 333 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AP003066.2-201ENST00000529375 555 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 RNU4ATAC-201ENST00000580972 127 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC008507.2-201ENST00000588402 1176 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 RN7SL787P-201ENST00000613000 284 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC116667.2-201ENST00000641075 823 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 AC110373.1-201ENST00000505994 3505 ntBASIC6.82□□□□□ -1.32
VTA1Q9NP79 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VTA1Q9NP79 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
VTA1Q9NP79 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 MIR375-201ENST00000362103 64 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 OR13C3-201ENST00000374781 1108 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 CBX1P3-201ENST00000413296 527 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 Z68694.1-201ENST00000413929 841 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AL158827.1-201ENST00000416300 391 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC073594.1-201ENST00000462065 364 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 RPS26P24-201ENST00000497656 331 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 PRELID3BP6-201ENST00000503839 571 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC096571.1-202ENST00000506634 735 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC114322.1-201ENST00000506771 926 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC005034.4-201ENST00000603612 899 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC078880.5-201ENST00000617845 421 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC126544.2-201ENST00000625174 749 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AL590396.4-201ENST00000636779 956 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 AC011369.2-201ENST00000624423 1567 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms