Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 THEM7P-201ENST00000419556 672 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 KCTD9P1-201ENST00000430462 1167 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 GAPDHP59-201ENST00000435908 267 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC023141.3-201ENST00000436698 278 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RPS7P3-201ENST00000443360 580 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC090804.1-201ENST00000448870 490 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 HMGB1P7-201ENST00000450921 612 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RN7SL568P-201ENST00000493069 298 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC106822.1-201ENST00000502647 526 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 GOLGA5P1-201ENST00000507317 980 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 OR4A41P-201ENST00000533053 928 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC139697.1-201ENST00000548429 745 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 uc_338.31-201ENST00000615595 186 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 uc_338.7-201ENST00000621834 124 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RBPJP5-201ENST00000449433 1447 ntBASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMG20AQ9NP66 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 RPL12P9-201ENST00000412942 488 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 MRPL53P1-201ENST00000414323 319 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AL139158.1-201ENST00000424719 340 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AL445466.1-201ENST00000448432 357 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC073476.1-201ENST00000452854 407 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC023245.1-201ENST00000468501 517 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC092865.4-201ENST00000477936 615 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC098818.1-201ENST00000478593 252 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC008629.2-201ENST00000503783 483 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC112484.3-201ENST00000505910 329 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 GAPDHP71-201ENST00000511530 1003 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC138938.1-201ENST00000515431 782 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AP003033.2-201ENST00000528901 805 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC027369.5-201ENST00000533838 755 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC121758.1-202ENST00000556917 658 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC002519.2-203ENST00000567043 837 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ARGFXP2-201ENST00000579304 949 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC012254.3-201ENST00000591183 2117 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 MIR6813-201ENST00000621638 56 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AC015871.5-202ENST00000623252 701 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
HMG20AQ9NP66 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms