Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AL035417.2-201ENST00000603887 796 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC018816.2-201ENST00000621460 353 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 uc_338.21-201ENST00000622458 147 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC110769.3-201ENST00000624567 1173 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC125238.2-201ENST00000430003 1440 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC022306.1-201ENST00000560489 1562 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC090771.1-201ENST00000585803 1618 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AL049634.1-201ENST00000453770 1720 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 SAMMSON-203ENST00000641005 2168 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LYARP1-201ENST00000436977 1501 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC103591.2-201ENST00000265259 766 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RNU6-501P-201ENST00000364072 100 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RN7SKP226-201ENST00000364912 300 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RNA5SP427-201ENST00000365323 119 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC007066.1-201ENST00000392902 381 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AL050335.1-201ENST00000396909 869 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 MIR1277-201ENST00000408536 78 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RNU2-42P-201ENST00000410697 113 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RNU2-41P-201ENST00000410991 178 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AL354983.1-201ENST00000434580 906 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 ARL5AP2-201ENST00000444698 533 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AL512593.1-201ENST00000444758 779 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AL390728.3-201ENST00000452704 270 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 DNAJC19P8-201ENST00000452887 259 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 PSPC1P2-201ENST00000455130 225 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RPL7P24-201ENST00000493052 752 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 PABPC1P1-201ENST00000506347 591 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 RPL7L1P4-201ENST00000513004 707 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 MAST4-IT1-201ENST00000514241 658 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 ADI1P2-201ENST00000514945 429 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 OR5AK1P-201ENST00000524837 922 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC124947.2-202ENST00000552735 133 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC005730.3-201ENST00000583067 366 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC078795.3-201ENST00000602913 472 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC006338.1-201ENST00000618453 749 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AC004009.2-201ENST00000623016 728 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 MTND1P37-201ENST00000636562 264 ntBASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BHLHE41Q9C0J9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms