Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 SNORD8-201ENST00000363915 110 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 RNU6-40P-201ENST00000384254 107 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AL645927.1-201ENST00000396783 406 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 UBE2V1P6-201ENST00000430840 422 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 SCAND3P1-201ENST00000439854 1060 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AL513321.1-201ENST00000441175 761 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AL158053.1-201ENST00000441503 453 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MTND6P5-201ENST00000448266 512 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 RPL32P33-201ENST00000487023 394 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC105420.1-201ENST00000504389 582 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC093770.1-201ENST00000511559 571 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC139365.2-201ENST00000517972 253 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 OR10G5P-201ENST00000532733 358 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 CYCSP1-201ENST00000604815 315 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC015849.2-201ENST00000605738 409 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AL355802.4-201ENST00000607635 548 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC120053.1-201ENST00000607706 736 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 GTF2IP4-201ENST00000453092 2054 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AC005034.3-201ENST00000604845 1747 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MRRFP1-201ENST00000435941 1675 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AC009501.3-201ENST00000605001 1352 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 OR13C3-201ENST00000374781 1108 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 GAPDHP42-201ENST00000406848 981 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL139148.1-201ENST00000427122 680 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 RPS26P4-201ENST00000431743 355 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL663074.2-201ENST00000440621 479 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL157884.3-201ENST00000448273 1184 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL451063.1-201ENST00000450164 1133 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL450023.1-201ENST00000450868 751 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 RPS23P1-201ENST00000491662 432 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 CYP4F27P-201ENST00000514557 494 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL391001.1-201ENST00000602747 715 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL136295.6-201ENST00000610486 658 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 CR589904.2-201ENST00000612533 440 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 RMST_5.1-201ENST00000618704 126 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 AL445493.3-201ENST00000619568 477 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 SNX18P3-202ENST00000565670 1750 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 DDX18P6-201ENST00000450119 1997 ntBASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTFDC1Q9BY42 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms