Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC244107.2-201ENST00000611773 76 ntBASIC7.84□□□□□ -1.15
SIN3AQ96ST3 AC109309.2-201ENST00000612597 332 ntBASIC7.84□□□□□ -1.15
SIN3AQ96ST3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 AL078621.3-201ENST00000623707 2042 ntBASIC7.84□□□□□ -1.15
SIN3AQ96ST3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SIN3AQ96ST3 AC140134.1-201ENST00000511830 3544 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 RNA5SP339-201ENST00000390987 122 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 RPL6P21-201ENST00000418672 846 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC009784.1-201ENST00000426484 460 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC023271.1-201ENST00000445936 1090 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC104634.1-201ENST00000452720 462 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 RN7SL197P-201ENST00000466981 299 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC127381.1-201ENST00000555979 939 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 MIR6768-201ENST00000610734 72 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AC099654.6-201ENST00000636487 512 ntBASIC7.83□□□□□ -1.16
SIN3AQ96ST3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.83□□□□□ -1.16
SIN3AQ96ST3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC235565.1-201ENST00000456962 1325 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC006600.2-201ENST00000624834 2506 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 SNORA70.6-201ENST00000383934 134 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC092642.1-201ENST00000392417 425 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC108161.1-201ENST00000461060 402 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 SCARNA16.4-201ENST00000516956 187 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 MTCO1P1-201ENST00000624263 1081 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 EIF3EP2-201ENST00000423042 1814 ntBASIC7.82□□□□□ -1.16
SIN3AQ96ST3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
SIN3AQ96ST3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 CASC19-260ENST00000641828 2001 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 RPSAP51-201ENST00000497462 645 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 USP9YP2-201ENST00000504503 1000 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 USP9YP1-201ENST00000513521 1002 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 HMGN1P9-201ENST00000515212 298 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 OR11J2P-201ENST00000555298 907 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AC007786.3-201ENST00000615154 596 ntBASIC7.81□□□□□ -1.16
SIN3AQ96ST3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SIN3AQ96ST3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SIN3AQ96ST3 MIR143-201ENST00000385300 106 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms