Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC119501.1-201ENST00000603646 475 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AP001962.1-201ENST00000624114 559 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC087565.3-203ENST00000641018 837 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 OR9K1P-202ENST00000641111 3217 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 HSPD1P7-201ENST00000447985 1686 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL159987.1-201ENST00000347911 293 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL121886.1-201ENST00000358609 435 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC005042.1-201ENST00000393397 800 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC127526.2-201ENST00000426436 775 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC009784.1-201ENST00000426484 460 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 HMGB3P24-201ENST00000433260 622 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL359265.1-201ENST00000440296 795 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 RPL32P33-201ENST00000487023 394 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC009120.1-201ENST00000493458 473 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 PSMA2P2-201ENST00000504319 686 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 SNORD46.2-201ENST00000516021 102 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL359219.2-201ENST00000555184 348 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AGGF1P7-201ENST00000562369 913 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC007448.1-201ENST00000582714 234 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC027243.2-201ENST00000602530 724 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC092944.2-201ENST00000605443 889 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL139041.1-201ENST00000605480 610 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 AP005431.1-201ENST00000618479 319 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AC021766.1-201ENST00000624404 741 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 AL132656.3-201ENST00000606384 1595 ntBASIC5.28□□□□□ -1.56
COL21A1Q96P44 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL21A1Q96P44 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL21A1Q96P44 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 OR4F13P-202ENST00000560066 2054 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC068870.3-201ENST00000625077 2536 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 RN7SKP15-201ENST00000364742 309 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 RNA5SP122-201ENST00000384457 108 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 RNA5SP284-201ENST00000384547 118 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AL358178.1-201ENST00000407698 397 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AL133482.1-201ENST00000415988 498 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 NPM1P19-201ENST00000450070 712 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC144530.1-201ENST00000452862 555 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 RPSAP37-201ENST00000470913 821 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 UBFD1P1-201ENST00000473259 814 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC007998.1-201ENST00000474156 672 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 RPS17P5-201ENST00000498293 408 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 TRIM51DP-201ENST00000529746 596 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 HMGB1P42-201ENST00000532126 553 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms