Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 SNORD3G-201ENST00000362796 215 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RN7SKP44-201ENST00000363602 316 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RNU6-1297P-201ENST00000384415 104 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RNU6-1263P-201ENST00000384601 106 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HPS1Q92902 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HPS1Q92902 TRBV7-5-201ENST00000390382 345 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 U8.14-201ENST00000390843 143 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC133104.1-201ENST00000429100 218 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 RN7SL706P-201ENST00000460079 292 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RN7SL870P-201ENST00000460111 296 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RN7SL630P-201ENST00000483714 297 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RPL17P2-201ENST00000491913 451 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 HMGB3P15-201ENST00000507326 574 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC106774.1-201ENST00000515105 321 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 FABP5P7-201ENST00000524732 405 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC027544.3-201ENST00000535082 757 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC034105.3-201ENST00000565294 442 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 PRR13P4-201ENST00000577786 421 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC7.41□□□□□ -1.22
HPS1Q92902 CYP2C61P-201ENST00000604072 290 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 AC022893.3-201ENST00000607665 437 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 AC093913.1-201ENST00000614178 329 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC137590.2-201ENST00000619709 240 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 AL132796.3-201ENST00000624703 900 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 GDI2P1-201ENST00000429312 1336 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 AL512662.1-201ENST00000624850 2251 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 AC020549.1-201ENST00000536916 1440 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 AL592429.1-201ENST00000403909 1473 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HPS1Q92902 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 SPATA31C1-201ENST00000420021 3895 ntBASIC7.41□□□□□ -1.22
HPS1Q92902 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.41□□□□□ -1.22
HPS1Q92902 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
HPS1Q92902 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.4□□□□□ -1.22
HPS1Q92902 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 Y_RNA.231-201ENST00000364358 102 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.4□□□□□ -1.22
HPS1Q92902 RNU6-533P-201ENST00000384144 107 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 SNORD116-29-201ENST00000384516 83 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 SNORA19-201ENST00000384737 128 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 RPL32P23-201ENST00000397237 405 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 RNU6-985P-201ENST00000410182 104 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 RN7SKP152-201ENST00000410444 315 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 Y_RNA.608-201ENST00000410647 95 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HPS1Q92902 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.4□□□□□ -1.22
HPS1Q92902 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.4□□□□□ -1.22
HPS1Q92902 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.4□□□□□ -1.22
HPS1Q92902 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.4□□□□□ -1.22
HPS1Q92902 MTCYBP10-201ENST00000424905 650 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 FO393419.3-201ENST00000428741 282 ntBASIC7.4□□□□□ -1.22
HPS1Q92902 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.4□□□□□ -1.22
HPS1Q92902 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC7.4□□□□□ -1.22
HPS1Q92902 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.4□□□□□ -1.22
HPS1Q92902 OR51R1P-201ENST00000435309 952 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms