Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 HMGB3P5-201ENST00000428894 612 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 RPSAP65-201ENST00000429660 595 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC108479.1-201ENST00000431142 427 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 PTP4A1P3-201ENST00000433661 420 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL512661.1-201ENST00000434586 1253 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TRIM60P16-201ENST00000444048 694 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL139824.2-201ENST00000458731 1095 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 snoU109.3-201ENST00000459477 145 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 RPL32P14-201ENST00000463196 378 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 PDCL3P4-201ENST00000489621 720 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AK4P6-201ENST00000505168 528 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL158068.1-201ENST00000506116 616 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 MAST4-IT1-201ENST00000514241 658 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 RNU5A-7P-201ENST00000515979 116 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL356863.1-201ENST00000623378 1080 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC232271.1-201ENST00000602455 2715 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 SELENOWP1-201ENST00000322792 252 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 RN7SKP146-201ENST00000410242 334 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 RAB9AP4-201ENST00000415230 609 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 MTCO2P23-201ENST00000425216 680 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AL606490.7-201ENST00000433136 191 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC023245.1-201ENST00000468501 517 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC093770.1-201ENST00000511559 571 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AL121594.2-201ENST00000541658 472 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC139697.1-201ENST00000548429 745 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC093014.1-201ENST00000548926 724 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC015849.2-201ENST00000605738 409 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC009974.1-201ENST00000608881 455 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC092681.3-201ENST00000609463 678 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC104964.3-201ENST00000606115 2860 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 AC012254.3-201ENST00000591183 2117 ntBASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4AQ8WYN0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 TCP1P3-201ENST00000414406 1498 ntBASIC6.04□□□□□ -1.44
ATG4AQ8WYN0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms