Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC009506.2-201ENST00000420635 840 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC009237.13-201ENST00000603193 276 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC108865.2-201ENST00000606881 432 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 RPS2P45-201ENST00000469997 2057 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 MIR551A-201ENST00000385042 96 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 ADAM24P-201ENST00000398655 2101 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 PPIAP9-201ENST00000403866 498 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 GAPDHP42-201ENST00000406848 981 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC115283.1-201ENST00000427353 400 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 FTLP19-201ENST00000433300 394 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC005297.1-201ENST00000444765 862 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AL450996.1-201ENST00000445574 1202 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 LRRC37A14P-201ENST00000452297 462 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 TAAR4P-201ENST00000454843 1039 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AC079315.1-201ENST00000602952 623 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 PPATP2-201ENST00000605635 508 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AL096712.1-201ENST00000614561 159 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AP005431.1-201ENST00000618479 319 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 AL162456.1-201ENST00000634535 2006 ntBASIC5.67□□□□□ -1.5
CDKL3Q8IVW4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC023490.2-201ENST00000359859 470 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 RAB5CP1-201ENST00000395972 580 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC092106.1-201ENST00000444291 373 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms