Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PARP4P2-201ENST00000446672 3326 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC093909.5-201ENST00000621839 1799 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 VN1R37P-201ENST00000419096 748 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL512637.2-201ENST00000431287 1256 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 GAPDHP75-201ENST00000433910 943 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 TRIM60P16-201ENST00000444048 694 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL157884.3-201ENST00000448273 1184 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 TVP23BP2-201ENST00000455082 615 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 HMGB1P3-201ENST00000502802 616 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 SETP21-201ENST00000514799 892 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC113191.1-201ENST00000517759 403 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC138701.1-201ENST00000524329 714 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AL513327.3-201ENST00000602618 469 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 RPSAP75-201ENST00000605848 301 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC016597.2-201ENST00000613256 341 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 RFPL4AP6-201ENST00000616792 846 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC022400.9-201ENST00000623633 273 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC007683.2-201ENST00000624681 714 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC019080.5-201ENST00000624891 757 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 SNORA21-201ENST00000362423 132 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RNA5SP211-201ENST00000365516 117 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC087752.1-201ENST00000391360 558 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RPL11P3-201ENST00000395256 523 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL132875.1-201ENST00000403623 949 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL133260.1-201ENST00000405720 405 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC069282.1-201ENST00000411911 526 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 SFR1P2-201ENST00000421841 730 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC130360.1-201ENST00000425489 1117 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 MTND2P40-201ENST00000436718 841 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC096632.2-201ENST00000438139 1239 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL645638.1-201ENST00000440519 361 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms