Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 HSPD1P9-201ENST00000420325 1636 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC022306.1-201ENST00000560489 1562 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 RN7SKP29-201ENST00000410957 272 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC012519.1-201ENST00000424588 610 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL157385.1-201ENST00000446973 268 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC097463.1-201ENST00000447288 481 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL596266.1-201ENST00000448132 400 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PPIAP32-201ENST00000449940 472 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 TAAR4P-201ENST00000454843 1039 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 RN7SL254P-201ENST00000460609 284 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 HMGB1P19-201ENST00000517578 577 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 OR5AM1P-201ENST00000532136 1032 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 MT1CP-201ENST00000567054 174 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC090236.2-201ENST00000587933 1101 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 MIR6883-201ENST00000614952 78 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AF117829.2-201ENST00000619538 361 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AL136228.1-201ENST00000622221 319 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 AC015660.5-201ENST00000623238 564 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC58Q4VC31 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC58Q4VC31 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CCDC58Q4VC31 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC58Q4VC31 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC58Q4VC31 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC58Q4VC31 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL034370.1-201ENST00000397254 1590 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 CBX1P3-201ENST00000413296 527 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RPL7P56-201ENST00000429441 717 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC007679.3-201ENST00000434035 414 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 GAPDHP48-201ENST00000436626 961 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC016772.1-201ENST00000444170 1261 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC007383.1-201ENST00000445875 636 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC58Q4VC31 CFL1P4-201ENST00000451536 498 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RPS6P2-201ENST00000454208 705 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AZGP1P2-201ENST00000454506 345 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC073610.1-201ENST00000489971 396 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 RN7SL362P-201ENST00000494228 267 ntBASIC4.96□□□□□ -1.62
CCDC58Q4VC31 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms