Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.43□□□□□ -1.54
LTBQ06643 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.43□□□□□ -1.54
LTBQ06643 SNORD95-201ENST00000579879 68 ntBASIC5.43□□□□□ -1.54
LTBQ06643 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 AL645933.2-201ENST00000606743 1207 ntBASIC5.43□□□□□ -1.54
LTBQ06643 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 FAM27E2-201ENST00000619668 403 ntBASIC5.43□□□□□ -1.54
LTBQ06643 AC010608.3-201ENST00000625048 527 ntBASIC5.43□□□□□ -1.54
LTBQ06643 AC073488.3-201ENST00000631611 778 ntBASIC5.43□□□□□ -1.54
LTBQ06643 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
LTBQ06643 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.43□□□□□ -1.54
LTBQ06643 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.43□□□□□ -1.54
LTBQ06643 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LTBQ06643 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
LTBQ06643 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.43□□□□□ -1.54
LTBQ06643 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.43□□□□□ -1.54
LTBQ06643 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 AP000641.1-201ENST00000531988 1639 ntBASIC5.42□□□□□ -1.54
LTBQ06643 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.42□□□□□ -1.54
LTBQ06643 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 OR10R3P-201ENST00000361688 942 ntBASIC5.42□□□□□ -1.54
LTBQ06643 RNU1-134P-201ENST00000362935 165 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC007618.1-201ENST00000366455 732 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AL121977.1-201ENST00000401636 979 ntBASIC5.42□□□□□ -1.54
LTBQ06643 PTGES3P2-201ENST00000407942 482 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC245096.1-201ENST00000413104 546 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 AC092106.1-201ENST00000444291 373 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AL163193.1-201ENST00000444895 788 ntBASIC5.42□□□□□ -1.54
LTBQ06643 HMGN1P36-201ENST00000446623 298 ntBASIC5.42□□□□□ -1.54
LTBQ06643 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 AC016027.4-201ENST00000450866 277 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 RPSAP39-201ENST00000467439 883 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 GTF2IP9-201ENST00000502460 301 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC098862.1-201ENST00000504991 413 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 AC027338.1-201ENST00000514840 825 ntBASIC5.42□□□□□ -1.54
LTBQ06643 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.42□□□□□ -1.54
LTBQ06643 IGKV3D-25-201ENST00000519599 235 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.42□□□□□ -1.54
LTBQ06643 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.42□□□□□ -1.54
LTBQ06643 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.42□□□□□ -1.54
LTBQ06643 AC073333.2-201ENST00000603589 769 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC120053.1-201ENST00000607706 736 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AF129408.1-201ENST00000608767 431 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC093388.1-201ENST00000609166 430 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC006946.3-201ENST00000609791 756 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AP006248.3-201ENST00000623580 594 ntBASIC5.42□□□□□ -1.54
LTBQ06643 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.42□□□□□ -1.54
LTBQ06643 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.42□□□□□ -1.54
LTBQ06643 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.42□□□□□ -1.54
LTBQ06643 AL121839.2-201ENST00000565058 6943 ntBASIC5.42□□□□□ -1.54
LTBQ06643 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LTBQ06643 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LTBQ06643 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LTBQ06643 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.41□□□□□ -1.54
LTBQ06643 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.41□□□□□ -1.54
LTBQ06643 AL161756.3-201ENST00000641216 2071 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms