Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 AC007224.1-201ENST00000564410 144 ntBASIC5.31□□□□□ -1.56
CACNA1BQ00975 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CACNA1BQ00975 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CACNA1BQ00975 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CACNA1BQ00975 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CACNA1BQ00975 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 RNA5SP478-201ENST00000364657 115 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 RN7SL447P-201ENST00000494711 245 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC083829.1-201ENST00000503756 657 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC008629.2-201ENST00000503783 483 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC099676.1-201ENST00000608886 657 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC183089.2-201ENST00000637931 916 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC087269.2-201ENST00000641764 975 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC132825.1-201ENST00000463573 2247 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC007529.1-201ENST00000418574 2178 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 ZNF658B-201ENST00000602828 3408 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 MIR670-201ENST00000390142 98 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 OR13C1P-201ENST00000457612 963 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC078878.1-201ENST00000539832 958 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 NMNAT1P5-201ENST00000559657 841 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC027229.1-201ENST00000583887 253 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 SNORD91A-202ENST00000609620 191 ntBASIC5.3□□□□□ -1.56
CACNA1BQ00975 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.3□□□□□ -1.56
CACNA1BQ00975 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CACNA1BQ00975 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 RN7SKP224-201ENST00000364140 325 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 RNU1-43P-201ENST00000365052 165 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 SNORA67-201ENST00000384423 137 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 RPS27AP7-201ENST00000422792 455 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 OR56A7P-201ENST00000524865 941 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 AL031320.1-201ENST00000604177 357 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 INTS6P1-201ENST00000504674 2530 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 BX322650.1-201ENST00000332359 2143 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CACNA1BQ00975 MAPK10-383ENST00000642032 3390 ntBASIC5.29□□□□□ -1.56
CACNA1BQ00975 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CACNA1BQ00975 RN7SKP28-201ENST00000364770 305 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms