Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.16□□□□□ -1.58
RPS4XP62701 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RPS4XP62701 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RPS4XP62701 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.16□□□□□ -1.58
RPS4XP62701 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.16□□□□□ -1.58
RPS4XP62701 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPS4XP62701 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.15□□□□□ -1.58
RPS4XP62701 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
RPS4XP62701 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 DDX18P6-201ENST00000450119 1997 ntBASIC5.15□□□□□ -1.58
RPS4XP62701 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RPS4XP62701 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.15□□□□□ -1.58
RPS4XP62701 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.15□□□□□ -1.58
RPS4XP62701 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 MTCO1P8-201ENST00000416914 1523 ntBASIC5.15□□□□□ -1.58
RPS4XP62701 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPS4XP62701 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RPS4XP62701 RNU1-150P-201ENST00000362491 162 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 RNU6-1331P-201ENST00000363658 106 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.15□□□□□ -1.59
RPS4XP62701 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RPS4XP62701 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RPS4XP62701 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 RN7SKP293-201ENST00000411389 296 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AL513325.1-201ENST00000417716 1034 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 NIFKP3-201ENST00000417799 865 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 RNF10P1-201ENST00000418589 369 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 AL121776.1-201ENST00000429337 372 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.15□□□□□ -1.59
RPS4XP62701 AC138761.5-201ENST00000433967 325 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 AL512637.1-201ENST00000439523 1231 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 RPS23P2-201ENST00000463671 415 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 RN7SL177P-201ENST00000476596 299 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AC073610.1-201ENST00000489971 396 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.15□□□□□ -1.59
RPS4XP62701 HMGN2P36-201ENST00000529541 409 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.15□□□□□ -1.59
RPS4XP62701 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
RPS4XP62701 DHFRP1-201ENST00000579682 559 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 NPM1P45-201ENST00000583151 559 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 AC009303.3-201ENST00000591103 736 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.15□□□□□ -1.59
RPS4XP62701 AL031658.2-201ENST00000616850 651 ntBASIC5.15□□□□□ -1.59
RPS4XP62701 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RPS4XP62701 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RPS4XP62701 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.15□□□□□ -1.59
RPS4XP62701 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RPS4XP62701 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RPS4XP62701 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RPS4XP62701 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RPS4XP62701 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.15□□□□□ -1.59
RPS4XP62701 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPS4XP62701 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPS4XP62701 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RPS4XP62701 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RPS4XP62701 MTHFD2P5-201ENST00000320415 844 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 MIR375-201ENST00000362103 64 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RPS4XP62701 U3.25-201ENST00000391209 220 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPS4XP62701 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 AL356968.2-201ENST00000412769 1257 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 MRPL53P1-201ENST00000414323 319 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 BX323845.3-201ENST00000428215 527 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 RAB9AP5-201ENST00000437794 597 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 RAB9AP2-201ENST00000443911 597 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.14□□□□□ -1.59
RPS4XP62701 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPS4XP62701 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 RN7SL570P-201ENST00000484405 292 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.14□□□□□ -1.59
RPS4XP62701 AC111000.6-201ENST00000514471 709 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 CYCSP22-201ENST00000517555 339 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 NPM1P52-201ENST00000518264 846 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 AC090022.1-201ENST00000546569 311 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
RPS4XP62701 AC022404.1-201ENST00000555320 273 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.14□□□□□ -1.59
RPS4XP62701 MIR4260-201ENST00000583107 67 ntBASIC5.14□□□□□ -1.59
RPS4XP62701 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.14□□□□□ -1.59
RPS4XP62701 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPS4XP62701 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms