Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 GLYATL1P2-202ENST00000588046 902 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 MIMT1-201ENST00000597105 1050 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AC103591.3-201ENST00000608684 209 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AL136097.3-201ENST00000611097 505 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC022400.9-201ENST00000623633 273 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC132825.8-201ENST00000640783 297 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 CLCA3P-203ENST00000490028 2781 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AL359976.1-201ENST00000418655 3528 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
EPHB3P54753 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.71□□□□□ -1.33
EPHB3P54753 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
EPHB3P54753 KARSP3-201ENST00000571212 1504 ntBASIC6.71□□□□□ -1.33
EPHB3P54753 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
EPHB3P54753 AL136531.3-201ENST00000624378 3658 ntBASIC6.71□□□□□ -1.33
EPHB3P54753 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
EPHB3P54753 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
EPHB3P54753 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
EPHB3P54753 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.33
EPHB3P54753 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
EPHB3P54753 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
EPHB3P54753 RNU6-867P-201ENST00000364956 107 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 RAP1BP1-201ENST00000412709 553 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.71□□□□□ -1.34
EPHB3P54753 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL713922.1-201ENST00000416477 747 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC009500.1-201ENST00000420684 583 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.71□□□□□ -1.34
EPHB3P54753 AC006366.1-201ENST00000422002 759 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 CYCSP52-201ENST00000422857 310 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 EIF5AP4-201ENST00000441206 465 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 TXNP2-201ENST00000443918 295 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 MYO5BP2-201ENST00000449815 1277 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 BZW1P1-201ENST00000454901 1240 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL359385.1-201ENST00000456509 365 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.71□□□□□ -1.34
EPHB3P54753 OR5H3P-201ENST00000502817 919 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC010374.1-201ENST00000503762 1237 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 MTND5P13-201ENST00000513046 1079 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 MTATP6P1-201ENST00000514057 681 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.71□□□□□ -1.34
EPHB3P54753 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.71□□□□□ -1.34
EPHB3P54753 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 OR4A2P-201ENST00000527276 913 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC036111.2-201ENST00000533247 901 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 DPPA3P2-201ENST00000553589 478 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC008015.1-201ENST00000555505 465 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.71□□□□□ -1.34
EPHB3P54753 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.71□□□□□ -1.34
EPHB3P54753 DHFRP1-201ENST00000579682 559 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC125494.3-201ENST00000602759 455 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL953862.2-201ENST00000603089 820 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL359704.2-201ENST00000604335 521 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC080013.4-201ENST00000607624 649 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC007349.4-201ENST00000608114 532 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AP001437.1-201ENST00000608783 456 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AC087241.4-201ENST00000612441 480 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 AL445647.2-201ENST00000615170 130 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
EPHB3P54753 AC067852.7-201ENST00000623270 535 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.71□□□□□ -1.34
EPHB3P54753 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.71□□□□□ -1.34
EPHB3P54753 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.71□□□□□ -1.34
EPHB3P54753 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
EPHB3P54753 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.7□□□□□ -1.34
EPHB3P54753 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms