Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP326-201ENST00000363209 110 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLCN3P51790 SNORA70.9-201ENST00000384370 135 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 RNU1-77P-201ENST00000390868 162 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC096921.1-201ENST00000411661 375 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC006455.6-201ENST00000426192 893 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 CYCSP12-201ENST00000437729 300 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 RPS4XP1-201ENST00000482189 787 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC008638.1-201ENST00000506035 866 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 RNU6-943P-201ENST00000516960 98 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 AC067805.1-201ENST00000559344 470 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.17□□□□□ -1.42
CLCN3P51790 AC016180.1-201ENST00000567945 403 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AL163952.1-202ENST00000569625 600 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.17□□□□□ -1.42
CLCN3P51790 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 MIR3908-201ENST00000579798 126 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN3P51790 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN3P51790 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 HIRAP1-201ENST00000605318 787 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC103798.2-201ENST00000624292 632 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 AC136428.4-201ENST00000634254 1155 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CLCN3P51790 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 AL034546.1-201ENST00000623740 3693 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 CCAT2-201ENST00000630920 1752 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 AC068870.1-201ENST00000563737 2455 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.16□□□□□ -1.42
CLCN3P51790 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.16□□□□□ -1.42
CLCN3P51790 LYPLA1P1-201ENST00000434514 622 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 RN7SL799P-201ENST00000475891 298 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 RN7SKP248-201ENST00000516278 305 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 RN7SKP99-201ENST00000517028 307 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.16□□□□□ -1.42
CLCN3P51790 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.16□□□□□ -1.42
CLCN3P51790 AC051619.2-201ENST00000559063 397 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 AC000068.2-201ENST00000608816 460 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 U1.34-201ENST00000618578 162 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.16□□□□□ -1.42
CLCN3P51790 CASC19-264ENST00000641912 1184 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 AL359955.1-201ENST00000455242 3275 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 CASC19-255ENST00000641733 1385 ntBASIC6.16□□□□□ -1.42
CLCN3P51790 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CLCN3P51790 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN3P51790 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.15□□□□□ -1.42
CLCN3P51790 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CLCN3P51790 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLCN3P51790 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLCN3P51790 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.15□□□□□ -1.42
CLCN3P51790 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
CLCN3P51790 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLCN3P51790 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CLCN3P51790 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLCN3P51790 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLCN3P51790 RNU6-891P-201ENST00000384280 111 ntBASIC6.15□□□□□ -1.42
CLCN3P51790 AL121977.1-201ENST00000401636 979 ntBASIC6.15□□□□□ -1.42
CLCN3P51790 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.15□□□□□ -1.42
CLCN3P51790 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.15□□□□□ -1.42
CLCN3P51790 Z93019.1-201ENST00000416450 973 ntBASIC6.15□□□□□ -1.42
CLCN3P51790 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms