Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RPL23AP47-201ENST00000408017 460 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC092745.2-202ENST00000411880 369 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 AC004690.1-201ENST00000418216 328 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 YBX1P8-201ENST00000421881 943 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC018630.2-202ENST00000422992 927 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 USP9YP36-201ENST00000424581 829 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC127526.2-201ENST00000426436 775 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 BX679664.2-201ENST00000439282 283 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 DNAJC19P8-201ENST00000452887 259 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC130509.1-201ENST00000464158 433 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 RN7SL621P-201ENST00000472565 299 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 RPL5P15-201ENST00000475870 897 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 SNORA19.2-201ENST00000516013 114 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 TRMT10BP1-201ENST00000519377 943 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 IGJP1-201ENST00000522682 475 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 SOD1P2-201ENST00000563903 451 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF144AP50876 H3F3BP2-201ENST00000583907 357 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 MIR3171-201ENST00000584270 74 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF144AP50876 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF144AP50876 NDUFB9P1-201ENST00000604683 510 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC005332.6-201ENST00000613178 446 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF144AP50876 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF144AP50876 AC134503.1-201ENST00000633048 54 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 AC007823.1-201ENST00000569932 1566 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 OR5BR1P-201ENST00000524992 1330 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 ZNF300P1-201ENST00000356555 1822 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 RNA5SP463-201ENST00000363030 120 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 RNY4P34-201ENST00000364779 95 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 AL672167.2-201ENST00000377164 879 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RNF144AP50876 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 AL590143.1-201ENST00000405071 138 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 RN7SKP119-201ENST00000410753 273 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 GSTA10P-201ENST00000412182 576 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC009310.1-201ENST00000414414 451 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC093084.1-201ENST00000424233 687 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 BX890604.2-201ENST00000427883 474 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 SKP1P3-201ENST00000429280 487 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC098828.1-201ENST00000436164 440 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 HMGB3P12-201ENST00000438745 556 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AL353093.1-201ENST00000441292 436 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC239798.1-201ENST00000449024 1176 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AL135929.1-201ENST00000449287 552 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 FGF7P3-201ENST00000454645 303 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 OR7E7P-201ENST00000455678 1012 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AL590326.1-201ENST00000460857 334 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 RN7SL368P-201ENST00000473384 277 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RNF144AP50876 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 RN7SL239P-201ENST00000490061 300 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 RPL34P29-201ENST00000491411 325 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms