Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RN7SL350P-201ENST00000492591 299 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 RNU6-334P-201ENST00000517072 102 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 HMGB1P46-201ENST00000520062 610 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA1P49639 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA1P49639 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 CHEK2P2-201ENST00000554701 672 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 OR7E19P-202ENST00000589942 844 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC245884.10-201ENST00000597355 337 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC133794.1-201ENST00000602731 914 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AL451049.1-201ENST00000608672 497 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AL589743.6-201ENST00000611025 117 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 AC025016.1-201ENST00000616746 682 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC010608.3-201ENST00000625048 527 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 AL356118.1-201ENST00000635272 1078 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC009452.1-201ENST00000640823 606 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXA1P49639 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA1P49639 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA1P49639 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC133552.1-201ENST00000569988 4007 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
HOXA1P49639 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 OR10AB1P-202ENST00000641219 1686 ntBASIC4.95□□□□□ -1.62
HOXA1P49639 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA1P49639 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA1P49639 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
HOXA1P49639 AC073136.1-201ENST00000449426 2884 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXA1P49639 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXA1P49639 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXA1P49639 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXA1P49639 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXA1P49639 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXA1P49639 MTATP6P31-201ENST00000406985 692 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 RNA5SP155-201ENST00000411154 129 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 METTL15P3-201ENST00000415522 1221 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC092570.3-201ENST00000420113 693 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 MARK2P12-201ENST00000420129 585 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 SFR1P2-201ENST00000421841 730 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 MTCO1P51-201ENST00000427672 1060 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 MTCYBP32-201ENST00000427945 1084 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 ZNF965P-201ENST00000432501 817 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA1P49639 GTF2IP14-201ENST00000441415 586 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA1P49639 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA1P49639 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA1P49639 MTATP6P14-201ENST00000455189 673 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA1P49639 ABCC13-202ENST00000463099 3842 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 RN7SL643P-201ENST00000471845 291 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC009567.2-201ENST00000502989 349 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC018645.1-201ENST00000505003 109 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA1P49639 TPT1P8-201ENST00000510120 555 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA1P49639 AC022826.1-201ENST00000519383 805 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA1P49639 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA1P49639 AP000859.1-201ENST00000525536 307 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 OR6M2P-201ENST00000529831 871 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 OSBPL9P3-201ENST00000534523 595 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA1P49639 NOP56P3-201ENST00000549457 385 ntBASIC4.94□□□□□ -1.62
HOXA1P49639 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms